PDB entry 3vu3

View 3vu3 on RCSB PDB site
Description: Crystal structure of the Hfq and catalase HPII complex
Class: oxidoreductase/RNA binding protein
Keywords: hydroperoxidase HPII, RNA binding protein, OXIDOREDUCTASE-RNA BINDING PROTEIN complex
Deposited on 2012-06-15, released 2013-11-20
The last revision prior to the SCOPe 2.08 freeze date was dated 2013-11-27, with a file datestamp of 2013-11-22.
Experiment type: XRAY
Resolution: 2.85 Å
R-factor: 0.199
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: catalase hpii
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3vu3a1, d3vu3a2
  • Chain 'C':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3vu3c_
  • Chain 'D':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3vu3d_
  • Chain 'E':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3vu3e_
  • Chain 'F':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3vu3f_
  • Chain 'G':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3vu3g_
  • Chain 'H':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3vu3h_
  • Heterogens: HEM, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3vu3A (A:)
msqhneknphqhqsplhdsseakpgmdslapedgshrpaaeptppgaqptapgslkapdt
rneklnsledvrkgsenyalttnqgvriaddqnslragsrgptlledfilrekithfdhe
riperivhargsaahgyfqpykslsditkadflsdpnkitpvfvrfstvqggagsadtvr
dirgfatkfyteegifdlvgnntpiffiqdahkfpdfvhavkpephwaipqgqsahdtfw
dyvslqpetlhnvmwamsdrgiprsyrtmegfgihtfrlinaegkatfvrfhwkplagka
slvwdeaqkltgrdpdfhrrelweaieagdfpeyelgfqlipeedefkfdfdlldptkli
peelvpvqrvgkmvlnrnpdnffaeneqaafhpghivpgldftndpllqgrlfsytdtqi
srlggpnfheipinrptcpyhnfqrdgmhrmgidtnpanyepnsindnwpretppgpkrg
gfesyqervegnkvrerspsfgeyyshprlfwlsqtpfeqrhivdgfsfelskvvrpyir
ervvdqlahidltlaqavaknlgieltddqlnitpppdvnglkkdpslslyaipdgdvkg
rvvaillndevrsadllailkalkakgvhakllysrmgevtaddgtvlpiaatfagapsl
tvdavivpcgniadiadngdanyylmeaykhlkpialagdarkfkatikiadqgeegive
adsadgsfmdelltlmaahrvwsripkidkipa

    Sequence, based on observed residues (ATOM records): (download) 
    >3vu3A (A:)
dslapedgshrpaaeptppgaqptapgslkapdtrneklnsledvrkgsenyalttnqgv
riaddqnslragsrgptlledfilrekithfdheriperivhargsaahgyfqpykslsd
itkadflsdpnkitpvfvrfstvqggagsadtvrdirgfatkfyteegifdlvgnntpif
fiqdahkfpdfvhavkpephwaipqgqsahdtfwdyvslqpetlhnvmwamsdrgiprsy
rtmegfgihtfrlinaegkatfvrfhwkplagkaslvwdeaqkltgrdpdfhrrelweai
eagdfpeyelgfqlipeedefkfdfdlldptklipeelvpvqrvgkmvlnrnpdnffaen
eqaafhpghivpgldftndpllqgrlfsytdtqisrlggpnfheipinrptcpyhnfqrd
gmhrmgidtnpanyepnsindnwpretppgpkrggfesyqervegnkvrerspsfgeyys
hprlfwlsqtpfeqrhivdgfsfelskvvrpyirervvdqlahidltlaqavaknlgiel
tddqlnitpppdvnglkkdpslslyaipdgdvkgrvvaillndevrsadllailkalkak
gvhakllysrmgevtaddgtvlpiaatfagapsltvdavivpcgniadiadngdanyylm
eaykhlkpialagdarkfkatikiadqgeegiveadsadgsfmdelltlmaahrvwsrip
kidkipa

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3vu3C (C:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvshhsnnagggtssnyhhgssaqntsaqqdseete

    Sequence, based on observed residues (ATOM records): (download) 
    >3vu3C (C:)
slqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvps
rpv

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3vu3D (D:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvshhsnnagggtssnyhhgssaqntsaqqdseete

    Sequence, based on observed residues (ATOM records): (download) 
    >3vu3D (D:)
lqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvpsr
pvs

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >3vu3E (E:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvshhsnnagggtssnyhhgssaqntsaqqdseete

    Sequence, based on observed residues (ATOM records): (download) 
    >3vu3E (E:)
qslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvp
sr

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3vu3F (F:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvshhsnnagggtssnyhhgssaqntsaqqdseete

    Sequence, based on observed residues (ATOM records): (download) 
    >3vu3F (F:)
qslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvp
srp

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >3vu3G (G:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvshhsnnagggtssnyhhgssaqntsaqqdseete

    Sequence, based on observed residues (ATOM records): (download) 
    >3vu3G (G:)
qslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvp
srp

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >3vu3H (H:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvshhsnnagggtssnyhhgssaqntsaqqdseete

    Sequence, based on observed residues (ATOM records): (download) 
    >3vu3H (H:)
slqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvps
rpv