PDB entry 3v4d

View 3v4d on RCSB PDB site
Description: Crystal structure of RutC protein a member of the YjgF family from E.coli
Class: oxidoreductase
Keywords: Structural Genomics, PSI-Biology, New York Structural Genomics Research Consortium, NYSGRC, OXIDOREDUCTASE
Deposited on 2011-12-14, released 2012-01-04
The last revision prior to the SCOPe 2.06 freeze date was dated 2012-12-12, with a file datestamp of 2012-12-07.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: 0.195
AEROSPACI score: 0.49 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Aminoacrylate peracid reductase RutC
    Species: Escherichia coli O6 [TaxId:217992]
    Gene: c1147, rutC
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3v4da_
  • Chain 'B':
    Compound: Aminoacrylate peracid reductase RutC
    Species: Escherichia coli O6 [TaxId:217992]
    Gene: c1147, rutC
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0AFQ6 (6-End)
      • expression tag (5)
    Domains in SCOPe 2.06: d3v4db1, d3v4db2
  • Chain 'C':
    Compound: Aminoacrylate peracid reductase RutC
    Species: Escherichia coli O6 [TaxId:217992]
    Gene: c1147, rutC
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0AFQ6 (6-133)
      • expression tag (4-5)
    Domains in SCOPe 2.06: d3v4dc1, d3v4dc2
  • Chain 'D':
    Compound: Aminoacrylate peracid reductase RutC
    Species: Escherichia coli O6 [TaxId:217992]
    Gene: c1147, rutC
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0AFQ6 (6-133)
      • expression tag (4-5)
    Domains in SCOPe 2.06: d3v4dd1, d3v4dd2
  • Chain 'E':
    Compound: Aminoacrylate peracid reductase RutC
    Species: Escherichia coli O6 [TaxId:217992]
    Gene: c1147, rutC
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0AFQ6 (6-133)
      • expression tag (4-5)
    Domains in SCOPe 2.06: d3v4de1, d3v4de2
  • Chain 'F':
    Compound: Aminoacrylate peracid reductase RutC
    Species: Escherichia coli O6 [TaxId:217992]
    Gene: c1147, rutC
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0AFQ6 (6-End)
      • expression tag (0-5)
    Domains in SCOPe 2.06: d3v4df1, d3v4df2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3v4dA (A:)
lyfqghmpksviipagssaplapfvpgtladgvvyvsgtlafdqhnnvlfaddpkaqtrh
vletirkvietaggtmadvtfnsifitdwknyaaineiyaeffpgdkparfciqcglvkp
dalveiatiahiak

    Sequence, based on observed residues (ATOM records): (download) 
    >3v4dA (A:)
pksviipagpfvpgtladgvvyvsgtlafdqhnnvlfaddpkaqtrhvletirkvietag
gtmadvtfnsifitdwknyaaineiyaeffpgdkparfciqcglvkpdalveiatiahia

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3v4dB (B:)
lyfqghmpksviipagssaplapfvpgtladgvvyvsgtlafdqhnnvlfaddpkaqtrh
vletirkvietaggtmadvtfnsifitdwknyaaineiyaeffpgdkparfciqcglvkp
dalveiatiahiak

    Sequence, based on observed residues (ATOM records): (download) 
    >3v4dB (B:)
hmpksviipagssaapfvpgtladgvvyvsgtlafdqhnnvlfaddpkaqtrhvletirk
vietaggtmadvtfnsifitdwknyaaineiyaeffpgdkparfciqcglvkpdalveia
tiahi

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3v4dC (C:)
lyfqghmpksviipagssaplapfvpgtladgvvyvsgtlafdqhnnvlfaddpkaqtrh
vletirkvietaggtmadvtfnsifitdwknyaaineiyaeffpgdkparfciqcglvkp
dalveiatiahiak

    Sequence, based on observed residues (ATOM records): (download) 
    >3v4dC (C:)
ghmpksviipagsapfvpgtladgvvyvsgtlafdqhnnvlfaddpkaqtrhvletirkv
ietaggtmadvtfnsifitdwknyaaineiyaeffpgdkparfciqcglvkpdalveiat
iahiak

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3v4dD (D:)
lyfqghmpksviipagssaplapfvpgtladgvvyvsgtlafdqhnnvlfaddpkaqtrh
vletirkvietaggtmadvtfnsifitdwknyaaineiyaeffpgdkparfciqcglvkp
dalveiatiahiak

    Sequence, based on observed residues (ATOM records): (download) 
    >3v4dD (D:)
ghmpksviipagssaplapfvpgtladgvvyvsgtlafdqhnnvlfaddpkaqtrhvlet
irkvietaggtmadvtfnsifitdwknyaaineiyaeffpgdkparfciqcglvkpdalv
eiatiahiak

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >3v4dE (E:)
lyfqghmpksviipagssaplapfvpgtladgvvyvsgtlafdqhnnvlfaddpkaqtrh
vletirkvietaggtmadvtfnsifitdwknyaaineiyaeffpgdkparfciqcglvkp
dalveiatiahiak

    Sequence, based on observed residues (ATOM records): (download) 
    >3v4dE (E:)
ghmpksviipagspfvpgtladgvvyvsgtlafdqhnnvlfaddpkaqtrhvletirkvi
etaggtmadvtfnsifitdwknyaaineiyaeffpgdkparfciqcglvkpdalveiati
ahiak

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3v4dF (F:)
lyfqghmpksviipagssaplapfvpgtladgvvyvsgtlafdqhnnvlfaddpkaqtrh
vletirkvietaggtmadvtfnsifitdwknyaaineiyaeffpgdkparfciqcglvkp
dalveiatiahiak

    Sequence, based on observed residues (ATOM records): (download) 
    >3v4dF (F:)
lyfqghmpksviipagssaplapfvpgtladgvvyvsgtlafdqhnnvlfaddpkaqtrh
vletirkvietaggtmadvtfnsifitdwknyaaineiyaeffpgdkparfciqcglvkp
dalveiatiahia