SCOPe 2.05: Structural Classification of Proteins

PDB entry 3td3

View 3td3 on RCSB PDB site
Description: Crystal structure of OmpA-like domain from Acinetobacter baumannii in complex with glycine
Class: membrane protein,peptide binding protein
Keywords: OmpA-like fold, cell-wall attachment, peptidoglycan-binding, MEMBRANE PROTEIN,PEPTIDE BINDING PROTEIN
Deposited on 2011-08-10, released 2011-10-26
The last revision prior to the SCOPe 2.05 freeze date was dated 2013-06-26, with a file datestamp of 2013-06-21.
Experiment type: XRAY
Resolution: 1.59 Å
R-factor: 0.183
AEROSPACI score: 0.62 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: Outer membrane protein omp38
Species: ACINETOBACTER BAUMANNII [TaxId:470]
Gene: omp38
Database cross-references and differences (RAF-indexed):
- Uniprot Q6RYW5 (4-122)
  - expression tag (3)
Domains in SCOPe 2.05: d3td3a_
Chain 'B':
Compound: Outer membrane protein omp38
Species: ACINETOBACTER BAUMANNII [TaxId:470]
Gene: omp38
Database cross-references and differences (RAF-indexed):
- Uniprot Q6RYW5 (4-122)
  - expression tag (3)
Domains in SCOPe 2.05: d3td3b_
Chain 'C':
Compound: Outer membrane protein omp38
Species: ACINETOBACTER BAUMANNII [TaxId:470]
Gene: omp38
Database cross-references and differences (RAF-indexed):
- Uniprot Q6RYW5 (4-122)
  - expression tag (3)
Domains in SCOPe 2.05: d3td3c_
Chain 'D':
Compound: Outer membrane protein omp38
Species: ACINETOBACTER BAUMANNII [TaxId:470]
Gene: omp38
Database cross-references and differences (RAF-indexed):
- Uniprot Q6RYW5 (4-122)
  - expression tag (1-3)
Domains in SCOPe 2.05: d3td3d_
Chain 'E':
Compound: Outer membrane protein omp38
Species: ACINETOBACTER BAUMANNII [TaxId:470]
Gene: omp38
Database cross-references and differences (RAF-indexed):
- Uniprot Q6RYW5 (4-122)
  - expression tag (3)
Domains in SCOPe 2.05: d3td3e_
Chain 'F':
Compound: Outer membrane protein omp38
Species: ACINETOBACTER BAUMANNII [TaxId:470]
Gene: omp38
Database cross-references and differences (RAF-indexed):
- Uniprot Q6RYW5 (4-122)
  - expression tag (1-3)
Domains in SCOPe 2.05: d3td3f_
Chain 'G':
Compound: Outer membrane protein omp38
Species: ACINETOBACTER BAUMANNII [TaxId:470]
Gene: omp38
Database cross-references and differences (RAF-indexed):
- Uniprot Q6RYW5 (4-122)
  - expression tag (1-3)
Domains in SCOPe 2.05: d3td3g_
Chain 'H':
Compound: Outer membrane protein omp38
Species: ACINETOBACTER BAUMANNII [TaxId:470]
Gene: omp38
Database cross-references and differences (RAF-indexed):
- Uniprot Q6RYW5 (4-122)
  - expression tag (2-3)
Domains in SCOPe 2.05: d3td3h_
Heterogens: GLY, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>3td3A (A:)
gshmeltedlnmelrvffdtnksnikdqykpeiakvaeklseypnatarieghtdntgpr
klnerlslaransvksalvneynvdasrlstqgfawdqpiadnktkegramnrrvfatit
gsr