PDB entry 3sb2

View 3sb2 on RCSB PDB site
Description: Crystal Structure of the RNA chaperone Hfq from Herbaspirillum seropedicae SMR1
Class: chaperone
Keywords: Sm-like, RNA chaperone, CHAPERONE
Deposited on 2011-06-03, released 2012-01-04
The last revision prior to the SCOPe 2.05 freeze date was dated 2012-01-11, with a file datestamp of 2012-01-06.
Experiment type: XRAY
Resolution: 2.63 Å
R-factor: 0.203
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein hfq
    Species: Herbaspirillum seropedicae [TaxId:757424]
    Gene: hfq, Hsero_2948
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3sb2a_
  • Chain 'B':
    Compound: Protein hfq
    Species: Herbaspirillum seropedicae [TaxId:757424]
    Gene: hfq, Hsero_2948
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3sb2b_
  • Chain 'C':
    Compound: Protein hfq
    Species: Herbaspirillum seropedicae [TaxId:757424]
    Gene: hfq, Hsero_2948
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3sb2c_
  • Chain 'D':
    Compound: Protein hfq
    Species: Herbaspirillum seropedicae [TaxId:757424]
    Gene: hfq, Hsero_2948
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3sb2d_
  • Chain 'E':
    Compound: Protein hfq
    Species: Herbaspirillum seropedicae [TaxId:757424]
    Gene: hfq, Hsero_2948
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3sb2e_
  • Chain 'F':
    Compound: Protein hfq
    Species: Herbaspirillum seropedicae [TaxId:757424]
    Gene: hfq, Hsero_2948
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3sb2f_
  • Heterogens: GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3sb2A (A:)
msnkgqllqdpflnalrkehvpvsiylvngiklqghvesfdqyvvllrntvtqmvykhai
stvvparavnlslesssde

    Sequence, based on observed residues (ATOM records): (download) 
    >3sb2A (A:)
qllqdpflnalrkehvpvsiylvngiklqghvesfdqyvvllrntvtqmvykhaistvvp
aravnlsle

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3sb2B (B:)
msnkgqllqdpflnalrkehvpvsiylvngiklqghvesfdqyvvllrntvtqmvykhai
stvvparavnlslesssde

    Sequence, based on observed residues (ATOM records): (download) 
    >3sb2B (B:)
qllqdpflnalrkehvpvsiylvngiklqghvesfdqyvvllrntvtqmvykhaistvvp
aravn

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3sb2C (C:)
msnkgqllqdpflnalrkehvpvsiylvngiklqghvesfdqyvvllrntvtqmvykhai
stvvparavnlslesssde

    Sequence, based on observed residues (ATOM records): (download) 
    >3sb2C (C:)
llqdpflnalrkehvpvsiylvngiklqghvesfdqyvvllrntvtqmvykhaistvvpa
r

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3sb2D (D:)
msnkgqllqdpflnalrkehvpvsiylvngiklqghvesfdqyvvllrntvtqmvykhai
stvvparavnlslesssde

    Sequence, based on observed residues (ATOM records): (download) 
    >3sb2D (D:)
qllqdpflnalrkehvpvsiylvngiklqghvesfdqyvvllrntvtqmvykhaistvvp
aravnl

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >3sb2E (E:)
msnkgqllqdpflnalrkehvpvsiylvngiklqghvesfdqyvvllrntvtqmvykhai
stvvparavnlslesssde

    Sequence, based on observed residues (ATOM records): (download) 
    >3sb2E (E:)
llqdpflnalrkehvpvsiylvngiklqghvesfdqyvvllrntvtqmvykhaistvvpa
ravnls

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3sb2F (F:)
msnkgqllqdpflnalrkehvpvsiylvngiklqghvesfdqyvvllrntvtqmvykhai
stvvparavnlslesssde

    Sequence, based on observed residues (ATOM records): (download) 
    >3sb2F (F:)
qllqdpflnalrkehvpvsiylvngiklqghvesfdqyvvllrntvtqmvykhaistvvp
aravnls