PDB entry 3q9u
View 3q9u on RCSB PDB site
Description: In silico and in vitro co-evolution of a high affinity complementary protein-protein interface
Class: protein binding, de novo protein
Keywords: Structural Genomics, Israel Structural Proteomics Center, ISPC, Prb-binding designed ankyrin repeat, PROTEIN BINDING, DE NOVO PROTEIN
Deposited on
2011-01-10, released
2011-04-20
The last revision prior to the SCOPe 2.05 freeze date was dated
2011-07-20, with a file datestamp of
2011-07-15.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.244
AEROSPACI score: 0.31
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: CoA binding protein
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d3q9ua_ - Chain 'B':
Compound: CoA binding protein
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d3q9ub_ - Chain 'C':
Compound: consensus ankyrin repeat
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d3q9uc_ - Chain 'D':
Compound: consensus ankyrin repeat
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d3q9ud_ - Heterogens: COA
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3q9uA (A:)
atrpidgltdegiretltrykkialvgaspkperdanivmkyllehgydvypvnpnyeev
lgrkcypsvldipdkievvdlfvnpakawrfvayaikkgakvvwfqyntyyplaarqakg
agliivanrcmmrehkrllge
Sequence, based on observed residues (ATOM records): (download)
>3q9uA (A:)
atrpidgltdegiretltrykkialvgaspkperdanivmkyllehgydvypvnpnyeev
lgrkcypsvldipdkievvdlfvnpakawrfvayaikkgakvvwfqyntyyplaarqagl
iivanrcmmrehkrllge
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3q9uB (B:)
atrpidgltdegiretltrykkialvgaspkperdanivmkyllehgydvypvnpnyeev
lgrkcypsvldipdkievvdlfvnpakawrfvayaikkgakvvwfqyntyyplaarqakg
agliivanrcmmrehkrllge
Sequence, based on observed residues (ATOM records): (download)
>3q9uB (B:)
atrpidgltdegiretltrykkialvgaspkperdanivmkyllehgydvypvnpnyeev
lgrkcypsvldipdkievvdlfvnpakawrfvayaikkgakvvwfqyntyyplaagagli
ivanrcmmrehkrllg
- Chain 'C':
Sequence, based on SEQRES records: (download)
>3q9uC (C:)
afgqdlgkklleaaaagqddevrilmangadvnatddngltplhlaaangqleivevllk
ngadvnasdsagitplhlaaydghleivevllkhgadvnaydragwtplhlaalsgqlei
vevllkhgadvnaqdalgltafdisinqgqedlaeilq
Sequence, based on observed residues (ATOM records): (download)
>3q9uC (C:)
fgqdlgkklleaaaagqddevrilmangadvnatddngltplhlaaangqleivevllkn
gadvnasdsagitplhlaaydghleivevllkhgadvnaydragwtplhlaalsgqleiv
evllkhgadvnaqdalgltafdisinqgqedlaeilq
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>3q9uD (D:)
afgqdlgkklleaaaagqddevrilmangadvnatddngltplhlaaangqleivevllk
ngadvnasdsagitplhlaaydghleivevllkhgadvnaydragwtplhlaalsgqlei
vevllkhgadvnaqdalgltafdisinqgqedlaeilq