PDB entry 3psn

View 3psn on RCSB PDB site
Description: Crystal structure of mouse VPS29 complexed with Mn2+
Class: hydrolase
Keywords: Phosphtase fold, Scaffolding, membrane trafficking, VPS35, TBC1D5, SNX1, HYDROLASE
Deposited on 2010-12-02, released 2010-12-15
The last revision prior to the SCOPe 2.06 freeze date was dated 2010-12-15, with a file datestamp of 2010-12-10.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.197
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Vacuolar protein sorting-associated protein 29
    Species: Mus musculus [TaxId:10090]
    Gene: Vps29
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9QZ88 (10-191)
      • expression tag (9)
    Domains in SCOPe 2.06: d3psna1, d3psna2
  • Chain 'B':
    Compound: Vacuolar protein sorting-associated protein 29
    Species: Mus musculus [TaxId:10090]
    Gene: Vps29
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3psnb_
  • Heterogens: MN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3psnA (A:)
    gspefgtrdrmlvlvlgdlhiphrcnslpakfkkllvpgkiqhilctgnlctkesydylk
    tlagdvhivrgdfdenlnypeqkvvtvgqfkiglihghqvipwgdmaslallqrqfdvdi
    lisghthkfeafehenkfyinpgsatgaynaletniipsfvlmdiqastvvtyvyqligd
    dvkverieykks
    

    Sequence, based on observed residues (ATOM records): (download)
    >3psnA (A:)
    rmlvlvlgdlhiphrcnslpakfkkllvpgkiqhilctgnlctkesydylktlagdvhiv
    rgdfdenlnypeqkvvtvgqfkiglihghqvipwgdmaslallqrqfdvdilisghthkf
    eafehenkfyinpgsatgaynaletniipsfvlmdiqastvvtyvyqligddvkveriey
    kks
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >3psnB (B:)
    gspefgtrdrmlvlvlgdlhiphrcnslpakfkkllvpgkiqhilctgnlctkesydylk
    tlagdvhivrgdfdenlnypeqkvvtvgqfkiglihghqvipwgdmaslallqrqfdvdi
    lisghthkfeafehenkfyinpgsatgaynaletniipsfvlmdiqastvvtyvyqligd
    dvkverieykks
    

    Sequence, based on observed residues (ATOM records): (download)
    >3psnB (B:)
    mlvlvlgdlhiphrcnslpakfkkllvpgkiqhilctgnlctkesydylktlagdvhivr
    gdfdenlnypeqkvvtvgqfkiglihghqvipwgdmaslallqrqfdvdilisghthkfe
    afehenkfyinpgsatgaynaletniipsfvlmdiqastvvtyvyqligddvkverieyk
    ks