PDB entry 3pec
View 3pec on RCSB PDB site
Description: Siderocalin Recognitin of Carboxymycobactins: Interference by the immune system in intracellular iron acquisition by Mycobacteria tuberculosis
Class: antimicrobial protein
Keywords: 8-stranded anti-parallel beta barrel, Siderocalin, Siderophore binding, ANTIMICROBIAL PROTEIN
Deposited on
2010-10-25, released
2011-10-05
The last revision prior to the SCOPe 2.08 freeze date was dated
2011-10-05, with a file datestamp of
2011-09-30.
Experiment type: XRAY
Resolution: 2.19 Å
R-factor: 0.248
AEROSPACI score: 0.35
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Neutrophil gelatinase-associated lipocalin
Species: Homo sapiens [TaxId:9606]
Gene: LCN2, HNL, NGAL
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3peca_ - Chain 'B':
Compound: Neutrophil gelatinase-associated lipocalin
Species: Homo sapiens [TaxId:9606]
Gene: LCN2, HNL, NGAL
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3pecb_ - Chain 'C':
Compound: Neutrophil gelatinase-associated lipocalin
Species: Homo sapiens [TaxId:9606]
Gene: LCN2, HNL, NGAL
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3pecc_ - Heterogens: GOL, SO4, FE, NA, ZYG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3pecA (A:)
qdstsdlipapplskvplqqnfqdnqfqgkwyvvglagnailredkdpqkmyatiyelke
dksynvtsvlfrkkkcdywirtfvpgsqpgeftlgniksypgltsylvrvvstnynqham
vffkkvsqnreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqcidg
Sequence, based on observed residues (ATOM records): (download)
>3pecA (A:)
stsdlipapplskvplqqnfqdnqfqgkwyvvglagnailredkdpqkmyatiyelkedk
synvtsvlfrkkkcdywirtfvpgsqpgeftlgniksypgltsylvrvvstnynqhamvf
fkkvsqnreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqcidg
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3pecB (B:)
qdstsdlipapplskvplqqnfqdnqfqgkwyvvglagnailredkdpqkmyatiyelke
dksynvtsvlfrkkkcdywirtfvpgsqpgeftlgniksypgltsylvrvvstnynqham
vffkkvsqnreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqcidg
Sequence, based on observed residues (ATOM records): (download)
>3pecB (B:)
dlipapplskvplqqnfqdnqfqgkwyvvglagnailrqkmyatiyelkedksynvtsvl
frkkkcdywirtfvpgsqpgeftlgniksypgltsylvrvvstnynqhamvffkkvsqnr
eyfkitlygrtkeltskenfirfskslglpenhivfpvpidqcid
- Chain 'C':
Sequence, based on SEQRES records: (download)
>3pecC (C:)
qdstsdlipapplskvplqqnfqdnqfqgkwyvvglagnailredkdpqkmyatiyelke
dksynvtsvlfrkkkcdywirtfvpgsqpgeftlgniksypgltsylvrvvstnynqham
vffkkvsqnreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqcidg
Sequence, based on observed residues (ATOM records): (download)
>3pecC (C:)
tsdlipapplskvplqqnfqdnqfqgkwyvvglagnailredkdpqkmyatiyelkedks
ynvtsvlfrkkkcdywirtfvpgsqpgeftlgniksypgltsylvrvvstnynqhamvff
kkvsqnreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqcidg