PDB entry 3m5r
View 3m5r on RCSB PDB site
Description: Crystal Structure of Swine Flu Virus NS1 Effector Domain from H1N1 Influenza A/California/07/2009
Class: viral protein
Keywords: Viral protein, Swine Flu Virus, Influenza A H1N1 Subtype, Nonstructural Protein 1, Effector domain, Viral immune evasion, Structural Genomics, NIAID, Center for Structural Genomics of Infectious Diseases, CSGID
Deposited on
2010-03-13, released
2010-04-07
The last revision prior to the SCOPe 2.08 freeze date was dated
2017-11-08, with a file datestamp of
2017-11-03.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.31
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: nonstructural protein 1
Species: Influenza A virus [TaxId:641809]
Gene: NS1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3m5ra1, d3m5ra2 - Chain 'B':
Compound: nonstructural protein 1
Species: Influenza A virus [TaxId:641809]
Gene: NS1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3m5rb1, d3m5rb2 - Chain 'D':
Compound: nonstructural protein 1
Species: Influenza A virus [TaxId:641809]
Gene: NS1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3m5rd_ - Chain 'E':
Compound: nonstructural protein 1
Species: Influenza A virus [TaxId:641809]
Gene: NS1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3m5re_ - Chain 'F':
Compound: nonstructural protein 1
Species: Influenza A virus [TaxId:641809]
Gene: NS1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3m5rf_ - Chain 'G':
Compound: nonstructural protein 1
Species: Influenza A virus [TaxId:641809]
Gene: NS1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3m5rg_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3m5rA (A:)
gshmtiasvptsrylsdmtleemsrdwfmlmprqkiigplcvrldqaimeknivlkanfs
vifnrletlillrafteegaivgeisplpslpghtyedvknavgvligglewngntvrvs
eniqrfawrncde
Sequence, based on observed residues (ATOM records): (download)
>3m5rA (A:)
hmtiasvptsrylsdmtleemsrdwfmlmprqkiigplcvrldqaimeknivlkanfsvi
fnrletlillrafteegaivgeisplpslpghtyedvknavgvligglewngntvrvsen
iqrfaw
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3m5rB (B:)
gshmtiasvptsrylsdmtleemsrdwfmlmprqkiigplcvrldqaimeknivlkanfs
vifnrletlillrafteegaivgeisplpslpghtyedvknavgvligglewngntvrvs
eniqrfawrncde
Sequence, based on observed residues (ATOM records): (download)
>3m5rB (B:)
hmtiasvptsrylsdmtleemsrdwfmlmprqkiigplcvrldqaimeknivlkanfsvi
fnrletlillrafteegaivgeisplpslpghtyedvknavgvligglewngntvrvsen
iqrfaw
- Chain 'D':
Sequence, based on SEQRES records: (download)
>3m5rD (D:)
gshmtiasvptsrylsdmtleemsrdwfmlmprqkiigplcvrldqaimeknivlkanfs
vifnrletlillrafteegaivgeisplpslpghtyedvknavgvligglewngntvrvs
eniqrfawrncde
Sequence, based on observed residues (ATOM records): (download)
>3m5rD (D:)
svptsrylsdmtleemsrdwfmlmprqkiigplcvrldqaimeknivlkanfsvifnrle
tlillrafteegaivgeisplpslpghtyedvknavgvligglewngntvrvseniqrfa
w
- Chain 'E':
Sequence, based on SEQRES records: (download)
>3m5rE (E:)
gshmtiasvptsrylsdmtleemsrdwfmlmprqkiigplcvrldqaimeknivlkanfs
vifnrletlillrafteegaivgeisplpslpghtyedvknavgvligglewngntvrvs
eniqrfawrncde
Sequence, based on observed residues (ATOM records): (download)
>3m5rE (E:)
svptsrylsdmtleemsrdwfmlmprqkiigplcvrldqaimeknivlkanfsvifnrle
tlillrafteegaivgeisplpslpghtyedvknavgvligglewngntvrvseniqrfa
w
- Chain 'F':
Sequence, based on SEQRES records: (download)
>3m5rF (F:)
gshmtiasvptsrylsdmtleemsrdwfmlmprqkiigplcvrldqaimeknivlkanfs
vifnrletlillrafteegaivgeisplpslpghtyedvknavgvligglewngntvrvs
eniqrfawrncde
Sequence, based on observed residues (ATOM records): (download)
>3m5rF (F:)
svptsrylsdmtleemsrdwfmlmprqkiigplcvrldqaimeknivlkanfsvifnrle
tlillrafteegaivgeisplpslpghtyedvknavgvligglewngntvrvseniqrfa
w
- Chain 'G':
Sequence, based on SEQRES records: (download)
>3m5rG (G:)
gshmtiasvptsrylsdmtleemsrdwfmlmprqkiigplcvrldqaimeknivlkanfs
vifnrletlillrafteegaivgeisplpslpghtyedvknavgvligglewngntvrvs
eniqrfawrncde
Sequence, based on observed residues (ATOM records): (download)
>3m5rG (G:)
svptsrylsdmtleemsrdwfmlmprqkiigplcvrldqaimeknivlkanfsvifnrle
tlillrafteegaivgeisplpslpghtyedvknavgvligglewngntvrvseniqrfa
w