PDB entry 3j9s

View 3j9s on RCSB PDB site
Description: Single particle cryo-EM structure of rotavirus VP6 at 2.6 Angstrom resolution
Class: viral protein
Keywords: rotavirus, virus, VIRAL PROTEIN
Deposited on 2015-02-19, released 2015-03-11
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-07-18, with a file datestamp of 2018-07-13.
Experiment type: EM
Resolution: 2.6 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Intermediate capsid protein VP6
    Species: Bovine rotavirus strain UK/G6 [TaxId:10934]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3j9sa1, d3j9sa2
  • Heterogens: ZN, CL, CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3j9sA (A:)
mdvlyslsktlkdardkivegtlysnvsdliqqfnqmiitmngnefqtggignlpirnwn
fdfgllgttllnldanyvetarntidyfvdfvdnvcmdemvresqrngiapqsdslikls
gikfkrinfdnsseyienwnlqnrrqrtgftfhkpnifpysasftlnrsqpahdnlmgtm
wlnagseiqvagfdyscainapantqqfehivqlrrvlttatitllpdaerfsfprvits
adgattwyfnpvilrpnnveiefllngqiintyqarfgtiiarnfdtirlsfqlmrppnm
tpavaalfpnaqpfehhatvgltlriesavcesvladasetmlanvtsvrqeyaipvgpv
fppgmnwtdlitnyspsrednlqrvftvasirsmlvk