PDB entry 3emk

View 3emk on RCSB PDB site
Description: 2.5A crystal structure of glucose/ribitol dehydrogenase from brucella melitensis
Class: oxidoreductase
Keywords: BRUCELLA, MELITENSIS, GLUCOSE, RIBITOL, DEHYDROGENASE, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, SSGCID, Oxidoreductase
Deposited on 2008-09-24, released 2008-10-28
The last revision prior to the SCOPe 2.01 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.204
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: glucose/ribitol dehydrogenase
  Species: Brucella melitensis [TaxId:29459]
  Gene: BMEI1477
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q8YFP3 (1-245)
    • expression tag (0)
• Chain 'B':
  Compound: glucose/ribitol dehydrogenase
  Species: Brucella melitensis [TaxId:29459]
  Gene: BMEI1477
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q8YFP3 (1-245)
    • expression tag (0)
• Chain 'C':
  Compound: glucose/ribitol dehydrogenase
  Species: Brucella melitensis [TaxId:29459]
  Gene: BMEI1477
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q8YFP3 (1-245)
    • expression tag (0)
• Chain 'D':
  Compound: glucose/ribitol dehydrogenase
  Species: Brucella melitensis [TaxId:29459]
  Gene: BMEI1477
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q8YFP3 (1-245)
    • expression tag (0)
  Domains in SCOPe 2.01: d3emkd_
• Heterogens: HOH

PDB Chain Sequences:

• Chain 'A':
  No sequence available.
  
  
• Chain 'B':
  No sequence available.
  
  
• Chain 'C':
  No sequence available.
  
  
• Chain 'D':
  Sequence, based on SEQRES records: (download)
  

  >3emkD (D:)
  smfdltgrkalvtgatgglgeaiaralhaqgaivglhgtreeklkelaaelgerifvfpa
  nlsdreavkalgqkaeeemggvdilvnnagitrdglfvrmsdedwdavltvnltsvfnlt
  relthpmmrrrngriinitsivgvtgnpgqanycaskagligfskslaqeiasrnvtvnc
  iapgfiesamtgklnekqkdaimgnipmkrmgvgadiaaavvylasdeaayvtgqtlhvn
  ggmami
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >3emkD (D:)
  smfdltgrkalvtgatgglgeaiaralhaqgaivglhgtreeklkelaaelgerifvfpa
  nlsdreavkalgqkaeeemggvdilvnnagitrdglfvrmsdedwdavltvnltsvfnlt
  relthpmmrrrngriinitsivgvtgnpgqanycaskagligfskslaqeiasrnvtvnc
  iapgfieekqkdaimgnipmkrmgvgadiaaavvylasdeaayvtgqtlhvnggmami