PDB entry 3cpr

View 3cpr on RCSB PDB site
Description: The crystal structure of Corynebacterium glutamicum dihydrodipicolinate synthase to 2.2 A resolution
Class: lyase
Keywords: (beta/alpha)8-barrel fold with a C-terminal alpha-helical segment, Amino-acid biosynthesis, Cytoplasm, Diaminopimelate biosynthesis, Lyase, Lysine biosynthesis, Schiff base
Deposited on 2008-04-01, released 2008-11-18
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.228
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Dihydrodipicolinate synthetase
    Species: Corynebacterium glutamicum [TaxId:1718]
    Gene: dapA
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q546B6 (4-303)
      • expression tag (2-3)
      • see remark 999 (268)
    Domains in SCOPe 2.06: d3cpra1, d3cpra2
  • Chain 'B':
    Compound: Dihydrodipicolinate synthetase
    Species: Corynebacterium glutamicum [TaxId:1718]
    Gene: dapA
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q546B6 (4-303)
      • expression tag (2-3)
      • see remark 999 (268)
    Domains in SCOPe 2.06: d3cprb1, d3cprb2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3cprA (A:)
maitstgltaktgvehfgtvgvamvtpftesgdidiaagrevaaylvdkgldslvlagtt
gesptttaaeklellkavreevgdrakliagvgtnntrtsvelaeaaasagadgllvvtp
yyskpsqegllahfgaiaaatevpiclydipgrsgipiesdtmrrlselptilavkdakg
dlvaatsliketglawysgddplnlvwlalggsgfisvighaaptalrelytsfeegdlv
rareinaklsplvaaqgrlggvslakaalrlqginvgdprlpimapneqelealredmkk
agvl

    Sequence, based on observed residues (ATOM records): (download) 
    >3cprA (A:)
itstgltaktgvehfgtvgvamvtpftesgdidiaagrevaaylvdkgldslvlagttge
sptttaaeklellkavreevgdrakliagvgtnntrtsvelaeaaasagadgllvvtpyy
skpsqegllahfgaiaaatevpiclydipgrsgipiesdtmrrlselptilavkdakgdl
vaatsliketglawysgddplnlvwlalggsgfisvighaaptalrelytsfeegdlvra
reinaklsplvaaqgrlggvslakaalrlqginvgdprlpimapneqelealredmkkag
vl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3cprB (B:)
maitstgltaktgvehfgtvgvamvtpftesgdidiaagrevaaylvdkgldslvlagtt
gesptttaaeklellkavreevgdrakliagvgtnntrtsvelaeaaasagadgllvvtp
yyskpsqegllahfgaiaaatevpiclydipgrsgipiesdtmrrlselptilavkdakg
dlvaatsliketglawysgddplnlvwlalggsgfisvighaaptalrelytsfeegdlv
rareinaklsplvaaqgrlggvslakaalrlqginvgdprlpimapneqelealredmkk
agvl

    Sequence, based on observed residues (ATOM records): (download) 
    >3cprB (B:)
itstgltaktgvehfgtvgvamvtpftesgdidiaagrevaaylvdkgldslvlagttge
sptttaaeklellkavreevgdrakliagvgtnntrtsvelaeaaasagadgllvvtpyy
skpsqegllahfgaiaaatevpiclydipgrsgipiesdtmrrlselptilavkdakgdl
vaatsliketglawysgddplnlvwlalggsgfisvighaaptalrelytsfeegdlvra
reinaklsplvaaqgrlggvslakaalrlqginvgdprlpimapneqelealredmkkag
vl