PDB entry 3cm8

View 3cm8 on RCSB PDB site
Description: A RNA polymerase subunit structure from virus
Class: RNA BINDING PROTEIN/Transferase
Keywords: Protein-peptide Complex, Nucleotide-binding, Nucleotidyltransferase, RNA replication, RNA-directed RNA polymerase, Transferase, RNA BINDING PROTEIN/Transferase COMPLEX
Deposited on 2008-03-21, released 2008-07-15
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.226
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Polymerase acidic protein
    Species: Influenza A virus [TaxId:11320]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3cm8a_
  • Chain 'B':
    Compound: peptide from RNA-directed RNA polymerase catalytic subunit
    Species: Influenza A virus [TaxId:11320]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9WLS3 (5-End)
      • expression tag (4)
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3cm8A (A:)
gplgspefpgriepflkttprplrlpdgppcsqrskfllmdalklsiedpshegegiply
daikcmktffgwkepnivkphekginpnyllawkqvlaelqdieneekipktknmrktsq
lkwalgenmapekvdfedckdvsdlrqydsdepkprslaswiqsefnkaceltdsswiel
deigedvapiehiasmrrnyftaevshcrateyimkgvyintallnascaamddfqlipm
iskcrtkegrrktnlygfiikgrshlrndtdvvnfvsmefsltdprlephkwekycvlei
gdmllrtaigqvsrpmflyvrtngtskikmkwgmemrrcllqslqqiesmieaessvkek
dmtkeffenksetwpigespkgmeegsigkvcrtllaksvfnslyaspqlegfsaesrkl
llivqalrdnlepgtfdlgglyeaieeclindpwvllnaswfnsflthalk

    Sequence, based on observed residues (ATOM records): (download) 
    >3cm8A (A:)
iepflkttprplrlpdgppcsqrskfllmdalklsieiplydaikcmktffgwkepnivk
phekginpnyllawkqvlaelqdieneekipktknmrktsqlkwalgenmapekvdfedc
kdvsepkprslaswiqsefnkaceltdsswieldeiiasmrrnyftaevshcrateyimk
gvyintallnascaamddfqlipmiskcrtkegrrktnlygfiikgrshlrndtdvvnfv
smefsltdprlephkwekycvleigdmllrtaigqvsrpmflyvrtngtskikmkwgmem
rrcllqslqqiesmieaessvkekdmtkeffenksetwpigespkgmeegsigkvcrtll
aksvfnslyaspqlegfsaesrklllivqalrdnlepgtfdlgglyeaieeclindpwvl
lnaswfnsflthalk

  • Chain 'B':
    No sequence available.