PDB entry 3ck8

View 3ck8 on RCSB PDB site
Description: B. thetaiotaomicron SusD with beta-cyclodextrin
Class: sugar binding protein
Keywords: TPR repeat, carbohydrate binding, starch binding, SUGAR BINDING PROTEIN
Deposited on 2008-03-14, released 2008-04-01
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: SusD
    Species: BACTEROIDES THETAIOTAOMICRON [TaxId:226186]
    Gene: SusD
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8A1G2 (Start-526)
      • see remark 999 (75)
    Domains in SCOPe 2.08: d3ck8a_
  • Chain 'B':
    Compound: SusD
    Species: BACTEROIDES THETAIOTAOMICRON [TaxId:226186]
    Gene: SusD
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8A1G2 (Start-526)
      • see remark 999 (75)
    Domains in SCOPe 2.08: d3ck8b_
  • Heterogens: CA, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3ck8A (A:)
gindldispidpqtggsfdqqgvfvkgyamlgvtgqkgidgspdldgqdegesgfyrttf
ncnelptdeclwawqknqdipqltsiswspssqrtewvyvrlgyditqynffldqtegmt
daetlrqraeirflralhywyfldlfgkapfkehfsndlpvekkgtelytyiqnelneie
admyeprqapfgradkaanwllrarlylnagvytgqtdyakaeeyaskvigsayklctny
selfmadndenenamqeiilpirqdgvktrnyggstylvcgtrvagmprmgttngwscif
araamvqkffsnledvpmlpadveiptkgldtdeqidafdaehgirtedmikaagddral
lysgvgggrrkiqtdaisgftdglsivkwqnyrsdgkpvshatypdtdiplfrlaeaylt
raeaifrqggdatgdinelrkranctrkvqtvteqelidewarefylegrrrsdlvrfgm
fttnkylwdwkggamngtsvasyynkypipvsdinnnrnmsqnegyk

    Sequence, based on observed residues (ATOM records): (download) 
    >3ck8A (A:)
qtggsfdqqgvfvkgyamlgvtdegesgfyrttfncnelptdeclwawqknqdipqltsi
swspssqrtewvyvrlgyditqynffldqtegmtdaetlrqraeirflralhywyfldlf
gkapfkehfsndlpvekkgtelytyiqnelneieadmyeprqapfgradkaanwllrarl
ylnagvytgqtdyakaeeyaskvigsayklctnyselfmadndenenamqeiilpirqdg
vktrnyggstylvcgtrvagmprmgttngwscifaraamvqkffsnledvpmlpadveip
tkgldtdeqidafdaehgirtedmikaagddrallysgvgggrrkiqtdaisgftdglsi
vkwqnyrsdgkpvshatypdtdiplfrlaeayltraeaifrqggdatgdinelrkranct
rkvqtvteqelidewarefylegrrrsdlvrfgmfttnkylwdwkggamngtsvasyynk
ypipvsdinnnrnmsqnegyk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3ck8B (B:)
gindldispidpqtggsfdqqgvfvkgyamlgvtgqkgidgspdldgqdegesgfyrttf
ncnelptdeclwawqknqdipqltsiswspssqrtewvyvrlgyditqynffldqtegmt
daetlrqraeirflralhywyfldlfgkapfkehfsndlpvekkgtelytyiqnelneie
admyeprqapfgradkaanwllrarlylnagvytgqtdyakaeeyaskvigsayklctny
selfmadndenenamqeiilpirqdgvktrnyggstylvcgtrvagmprmgttngwscif
araamvqkffsnledvpmlpadveiptkgldtdeqidafdaehgirtedmikaagddral
lysgvgggrrkiqtdaisgftdglsivkwqnyrsdgkpvshatypdtdiplfrlaeaylt
raeaifrqggdatgdinelrkranctrkvqtvteqelidewarefylegrrrsdlvrfgm
fttnkylwdwkggamngtsvasyynkypipvsdinnnrnmsqnegyk

    Sequence, based on observed residues (ATOM records): (download) 
    >3ck8B (B:)
qtggsfdqqgvfvkgyamlgvtdegesgfyrttfncnelptdeclwawqknqdipqltsi
swspssqrtewvyvrlgyditqynffldqtegmtdaetlrqraeirflralhywyfldlf
gkapfkehfsndlpvekkgtelytyiqnelneieadmyeprqapfgradkaanwllrarl
ylnagvytgqtdyakaeeyaskvigsayklctnyselfmadndenenamqeiilpirqdg
vktrnyggstylvcgtrvagmprmgttngwscifaraamvqkffsnledvpmlpadveip
tkgldtdeqidafdaehgirtedmikaagddrallysgvgggrrkiqtdaisgftdglsi
vkwqnyrsdgkpvshatypdtdiplfrlaeayltraeaifrqggdatgdinelrkranct
rkvqtvteqelidewarefylegrrrsdlvrfgmfttnkylwdwkggamngtsvasyynk
ypipvsdinnnrnmsqnegyk