PDB entry 3a5f

View 3a5f on RCSB PDB site
Description: High-resolution structure of DHDPS from Clostridium botulinum in complex with pyruvate
Class: lyase
Keywords: TIM barrel, enzyme, Amino-acid biosynthesis, Diaminopimelate biosynthesis, Lyase, Lysine biosynthesis, Schiff base
Deposited on 2009-08-06, released 2010-06-30
The last revision prior to the SCOPe 2.08 freeze date was dated 2012-12-26, with a file datestamp of 2012-12-21.
Experiment type: XRAY
Resolution: 1.19 Å
R-factor: 0.113
AEROSPACI score: 0.9 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Dihydrodipicolinate synthase
    Species: Clostridium botulinum A [TaxId:441770]
    Gene: dapA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3a5fa_
  • Chain 'B':
    Compound: Dihydrodipicolinate synthase
    Species: Clostridium botulinum A [TaxId:441770]
    Gene: dapA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3a5fb_
  • Heterogens: GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3a5fA (A:)
sifkgsgvaiitpftntgvdfdklseliewhiksktdaiivcgttgeattmteterketi
kfvidkvnkripviagtgsnntaasiamskwaesigvdgllvitpyynkttqkglvkhfk
avsdavstpiiiynvpgrtglnitpgtlkelcedknivavxeasgnisqiaqikalcgdk
ldiysgnddqiipilalggigvisvlanvipedvhnmcelylngkvnealkiqldslalt
nalfietnpipvktamnlmnmkvgdlrlplcemnennleilkkelkaynlm

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >3a5fB (B:)
sifkgsgvaiitpftntgvdfdklseliewhiksktdaiivcgttgeattmteterketi
kfvidkvnkripviagtgsnntaasiamskwaesigvdgllvitpyynkttqkglvkhfk
avsdavstpiiiynvpgrtglnitpgtlkelcedknivavxeasgnisqiaqikalcgdk
ldiysgnddqiipilalggigvisvlanvipedvhnmcelylngkvnealkiqldslalt
nalfietnpipvktamnlmnmkvgdlrlplcemnennleilkkelkaynlm