PDB entry 3a0c

View 3a0c on RCSB PDB site
Description: Crystal Structure of an anti-HIV mannose-binding lectin from Polygonatum cyrtonema Hua
Class: sugar binding protein
Keywords: beta-prism II, Lectin, SUGAR BINDING PROTEIN
Deposited on 2009-03-16, released 2010-03-16
The last revision prior to the SCOPe 2.08 freeze date was dated 2012-03-21, with a file datestamp of 2012-03-16.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.233
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Mannose/sialic acid-binding lectin
    Species: Polygonatum cyrtonema [TaxId:195526]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8L568 (0-End)
      • see remark 999 (26)
    Domains in SCOPe 2.08: d3a0ca_
  • Chain 'B':
    Compound: Mannose/sialic acid-binding lectin
    Species: Polygonatum cyrtonema [TaxId:195526]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8L568 (0-End)
      • see remark 999 (26)
    Domains in SCOPe 2.08: d3a0cb_
  • Chain 'C':
    Compound: Mannose/sialic acid-binding lectin
    Species: Polygonatum cyrtonema [TaxId:195526]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8L568 (0-End)
      • see remark 999 (26)
    Domains in SCOPe 2.08: d3a0cc_
  • Chain 'D':
    Compound: Mannose/sialic acid-binding lectin
    Species: Polygonatum cyrtonema [TaxId:195526]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8L568 (0-End)
      • see remark 999 (26)
    Domains in SCOPe 2.08: d3a0cd_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3a0cA (A:)
vnslsspnslftghslevgpsyrlimqgdcnfvlydsgkpvwasntgglgsgcrltlhnn
gnlviydqsnrviwqtktngkedhyvlvlqqdrnvviygpvvwatgsgpa

    Sequence, based on observed residues (ATOM records): (download) 
    >3a0cA (A:)
vnslsspnslftghslevgpsyrlimqgdcnfvlydsgkpvwasntgglgsgcrltlhnn
gnlviydqsnrviwqtktngkedhyvlvlqqdrnvviygpvvwatgsgp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3a0cB (B:)
vnslsspnslftghslevgpsyrlimqgdcnfvlydsgkpvwasntgglgsgcrltlhnn
gnlviydqsnrviwqtktngkedhyvlvlqqdrnvviygpvvwatgsgpa

    Sequence, based on observed residues (ATOM records): (download) 
    >3a0cB (B:)
vnslsspnslftghslevgpsyrlimqgdcnfvlydsgkpvwasntgglgsgcrltlhnn
gnlviydqsnrviwqtktngkedhyvlvlqqdrnvviygpvvwatgsgp

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3a0cC (C:)
vnslsspnslftghslevgpsyrlimqgdcnfvlydsgkpvwasntgglgsgcrltlhnn
gnlviydqsnrviwqtktngkedhyvlvlqqdrnvviygpvvwatgsgpa

    Sequence, based on observed residues (ATOM records): (download) 
    >3a0cC (C:)
vnslsspnslftghslevgpsyrlimqgdcnfvlydsgkpvwasntgglgsgcrltlhnn
gnlviydqsnrviwqtktngkedhyvlvlqqdrnvviygpvvwatgsgp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3a0cD (D:)
vnslsspnslftghslevgpsyrlimqgdcnfvlydsgkpvwasntgglgsgcrltlhnn
gnlviydqsnrviwqtktngkedhyvlvlqqdrnvviygpvvwatgsgpa

    Sequence, based on observed residues (ATOM records): (download) 
    >3a0cD (D:)
vnslsspnslftghslevgpsyrlimqgdcnfvlydsgkpvwasntgglgsgcrltlhnn
gnlviydqsnrviwqtktngkedhyvlvlqqdrnvviygpvvwatgsgp