PDB entry 2z9s

View 2z9s on RCSB PDB site
Description: Crystal Structure Analysis of rat HBP23/Peroxiredoxin I, Cys52Ser mutant
Class: oxidoreductase
Keywords: peroxiredoxin, 2-Cys type peroxiredoxin, decamer, thiol-specific antioxidant protein, HBP23, Cytoplasm, Oxidoreductase, Peroxidase, Phosphorylation, Redox-active center
Deposited on 2007-09-25, released 2007-11-20
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.205
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Peroxiredoxin-1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Prdx1, Tdpx2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q63716 (Start-198)
      • engineered (51)
    Domains in SCOPe 2.06: d2z9sa_
  • Chain 'B':
    Compound: Peroxiredoxin-1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Prdx1, Tdpx2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q63716 (Start-198)
      • engineered (51)
    Domains in SCOPe 2.06: d2z9sb_
  • Chain 'C':
    Compound: Peroxiredoxin-1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Prdx1, Tdpx2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q63716 (Start-198)
      • engineered (51)
    Domains in SCOPe 2.06: d2z9sc_
  • Chain 'D':
    Compound: Peroxiredoxin-1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Prdx1, Tdpx2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q63716 (Start-198)
      • engineered (51)
    Domains in SCOPe 2.06: d2z9sd_
  • Chain 'E':
    Compound: Peroxiredoxin-1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Prdx1, Tdpx2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q63716 (Start-198)
      • engineered (51)
    Domains in SCOPe 2.06: d2z9se_
  • Chain 'F':
    Compound: Peroxiredoxin-1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Prdx1, Tdpx2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q63716 (Start-198)
      • engineered (51)
    Domains in SCOPe 2.06: d2z9sf_
  • Chain 'G':
    Compound: Peroxiredoxin-1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Prdx1, Tdpx2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q63716 (Start-198)
      • engineered (51)
    Domains in SCOPe 2.06: d2z9sg_
  • Chain 'H':
    Compound: Peroxiredoxin-1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Prdx1, Tdpx2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q63716 (Start-198)
      • engineered (51)
    Domains in SCOPe 2.06: d2z9sh_
  • Chain 'I':
    Compound: Peroxiredoxin-1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Prdx1, Tdpx2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q63716 (Start-198)
      • engineered (51)
    Domains in SCOPe 2.06: d2z9si_
  • Chain 'J':
    Compound: Peroxiredoxin-1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Prdx1, Tdpx2
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q63716 (Start-198)
      • engineered (51)
    Domains in SCOPe 2.06: d2z9sj_

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2z9sA (A:)
    mssgnakighpapsfkatavmpdgqfkdislsdykgkyvvfffypldftfvspteiiafs
    draeefkklncqvigasvdshfchlawintpkkqgglgpmniplvsdpkrtiaqdygvlk
    adegisfrglfiiddkgilrqitindlpvgrsvdeilrlvqafqftdkhgevcpagwkpg
    sdtikpdvnkskeyfskqk
    

    Sequence, based on observed residues (ATOM records): (download)
    >2z9sA (A:)
    sgnakighpapsfkatavmpdgqfkdislsdykgkyvvfffypldftfvspteiiafsdr
    aeefkklncqvigasvdshfchlawintpkkqgglgpmniplvsdpkrtiaqdygvlkad
    egisfrglfiiddkgilrqitindlpvgrsvdeilrlvqafqftdkhgevcpagwkpgsd
    tikpdvnkskeyfskqk
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2z9sB (B:)
    mssgnakighpapsfkatavmpdgqfkdislsdykgkyvvfffypldftfvspteiiafs
    draeefkklncqvigasvdshfchlawintpkkqgglgpmniplvsdpkrtiaqdygvlk
    adegisfrglfiiddkgilrqitindlpvgrsvdeilrlvqafqftdkhgevcpagwkpg
    sdtikpdvnkskeyfskqk
    

    Sequence, based on observed residues (ATOM records): (download)
    >2z9sB (B:)
    sgnakighpapsfkatavmpdgqfkdislsdykgkyvvfffypldftfvspteiiafsdr
    aeefkklncqvigasvdshfchlawintpkkqgglgpmniplvsdpkrtiaqdygvlkad
    egisfrglfiiddkgilrqitindlpvgrsvdeilrlvqafqftdkhgevcpagwkpgsd
    tikpdvnkskeyfskqk
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >2z9sC (C:)
    mssgnakighpapsfkatavmpdgqfkdislsdykgkyvvfffypldftfvspteiiafs
    draeefkklncqvigasvdshfchlawintpkkqgglgpmniplvsdpkrtiaqdygvlk
    adegisfrglfiiddkgilrqitindlpvgrsvdeilrlvqafqftdkhgevcpagwkpg
    sdtikpdvnkskeyfskqk
    

    Sequence, based on observed residues (ATOM records): (download)
    >2z9sC (C:)
    sgnakighpapsfkatavmpdgqfkdislsdykgkyvvfffypldftfvspteiiafsdr
    aeefkklncqvigasvdshfchlawintpkkqgglgpmniplvsdpkrtiaqdygvlkad
    egisfrglfiiddkgilrqitindlpvgrsvdeilrlvqafqftdkhgevcpagwkpgsd
    tikpdvnkskeyfskqk
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >2z9sD (D:)
    mssgnakighpapsfkatavmpdgqfkdislsdykgkyvvfffypldftfvspteiiafs
    draeefkklncqvigasvdshfchlawintpkkqgglgpmniplvsdpkrtiaqdygvlk
    adegisfrglfiiddkgilrqitindlpvgrsvdeilrlvqafqftdkhgevcpagwkpg
    sdtikpdvnkskeyfskqk
    

    Sequence, based on observed residues (ATOM records): (download)
    >2z9sD (D:)
    sgnakighpapsfkatavmpdgqfkdislsdykgkyvvfffypldftfvspteiiafsdr
    aeefkklncqvigasvdshfchlawintpkkqgglgpmniplvsdpkrtiaqdygvlkad
    egisfrglfiiddkgilrqitindlpvgrsvdeilrlvqafqftdkhgevcpagwkpgsd
    tikpdvnkskeyfskqk
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >2z9sE (E:)
    mssgnakighpapsfkatavmpdgqfkdislsdykgkyvvfffypldftfvspteiiafs
    draeefkklncqvigasvdshfchlawintpkkqgglgpmniplvsdpkrtiaqdygvlk
    adegisfrglfiiddkgilrqitindlpvgrsvdeilrlvqafqftdkhgevcpagwkpg
    sdtikpdvnkskeyfskqk
    

    Sequence, based on observed residues (ATOM records): (download)
    >2z9sE (E:)
    sgnakighpapsfkatavmpdgqfkdislsdykgkyvvfffypldftfvspteiiafsdr
    aeefkklncqvigasvdshfchlawintpkkqgglgpmniplvsdpkrtiaqdygvlkad
    egisfrglfiiddkgilrqitindlpvgrsvdeilrlvqafqftdkhgevcpagwkpgsd
    tikpdvnkskeyfskqk
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >2z9sF (F:)
    mssgnakighpapsfkatavmpdgqfkdislsdykgkyvvfffypldftfvspteiiafs
    draeefkklncqvigasvdshfchlawintpkkqgglgpmniplvsdpkrtiaqdygvlk
    adegisfrglfiiddkgilrqitindlpvgrsvdeilrlvqafqftdkhgevcpagwkpg
    sdtikpdvnkskeyfskqk
    

    Sequence, based on observed residues (ATOM records): (download)
    >2z9sF (F:)
    sgnakighpapsfkatavmpdgqfkdislsdykgkyvvfffypldftfvspteiiafsdr
    aeefkklncqvigasvdshfchlawintpkkqgglgpmniplvsdpkrtiaqdygvlkad
    egisfrglfiiddkgilrqitindlpvgrsvdeilrlvqafqftdkhgevcpagwkpgsd
    tikpdvnkskeyfskqk
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >2z9sG (G:)
    mssgnakighpapsfkatavmpdgqfkdislsdykgkyvvfffypldftfvspteiiafs
    draeefkklncqvigasvdshfchlawintpkkqgglgpmniplvsdpkrtiaqdygvlk
    adegisfrglfiiddkgilrqitindlpvgrsvdeilrlvqafqftdkhgevcpagwkpg
    sdtikpdvnkskeyfskqk
    

    Sequence, based on observed residues (ATOM records): (download)
    >2z9sG (G:)
    sgnakighpapsfkatavmpdgqfkdislsdykgkyvvfffypldftfvspteiiafsdr
    aeefkklncqvigasvdshfchlawintpkkqgglgpmniplvsdpkrtiaqdygvlkad
    egisfrglfiiddkgilrqitindlpvgrsvdeilrlvqafqftdkhgevcpagwkpgsd
    tikpdvnkskeyfskqk
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >2z9sH (H:)
    mssgnakighpapsfkatavmpdgqfkdislsdykgkyvvfffypldftfvspteiiafs
    draeefkklncqvigasvdshfchlawintpkkqgglgpmniplvsdpkrtiaqdygvlk
    adegisfrglfiiddkgilrqitindlpvgrsvdeilrlvqafqftdkhgevcpagwkpg
    sdtikpdvnkskeyfskqk
    

    Sequence, based on observed residues (ATOM records): (download)
    >2z9sH (H:)
    sgnakighpapsfkatavmpdgqfkdislsdykgkyvvfffypldftfvspteiiafsdr
    aeefkklncqvigasvdshfchlawintpkkqgglgpmniplvsdpkrtiaqdygvlkad
    egisfrglfiiddkgilrqitindlpvgrsvdeilrlvqafqftdkhgevcpagwkpgsd
    tikpdvnkskeyfskqk
    

  • Chain 'I':
    Sequence, based on SEQRES records: (download)
    >2z9sI (I:)
    mssgnakighpapsfkatavmpdgqfkdislsdykgkyvvfffypldftfvspteiiafs
    draeefkklncqvigasvdshfchlawintpkkqgglgpmniplvsdpkrtiaqdygvlk
    adegisfrglfiiddkgilrqitindlpvgrsvdeilrlvqafqftdkhgevcpagwkpg
    sdtikpdvnkskeyfskqk
    

    Sequence, based on observed residues (ATOM records): (download)
    >2z9sI (I:)
    sgnakighpapsfkatavmpdgqfkdislsdykgkyvvfffypldftfvspteiiafsdr
    aeefkklncqvigasvdshfchlawintpkkqgglgpmniplvsdpkrtiaqdygvlkad
    egisfrglfiiddkgilrqitindlpvgrsvdeilrlvqafqftdkhgevcpagwkpgsd
    tikpdvnkskeyfskqk
    

  • Chain 'J':
    Sequence, based on SEQRES records: (download)
    >2z9sJ (J:)
    mssgnakighpapsfkatavmpdgqfkdislsdykgkyvvfffypldftfvspteiiafs
    draeefkklncqvigasvdshfchlawintpkkqgglgpmniplvsdpkrtiaqdygvlk
    adegisfrglfiiddkgilrqitindlpvgrsvdeilrlvqafqftdkhgevcpagwkpg
    sdtikpdvnkskeyfskqk
    

    Sequence, based on observed residues (ATOM records): (download)
    >2z9sJ (J:)
    sgnakighpapsfkatavmpdgqfkdislsdykgkyvvfffypldftfvspteiiafsdr
    aeefkklncqvigasvdshfchlawintpkkqgglgpmniplvsdpkrtiaqdygvlkad
    egisfrglfiiddkgilrqitindlpvgrsvdeilrlvqafqftdkhgevcpagwkpgsd
    tikpdvnkskeyfskqk