PDB entry 2vud

View 2vud on RCSB PDB site
Description: PA-IIL lectin from pseudomonas aeruginosa complexed with fucose- derived glycomimetics
Class: sugar binding protein
Keywords: lectin, pseudomonas aeruginosa, glycomimetics, fucose, sugar-binding protein, sugar binding protein
Deposited on 2008-05-22, released 2009-07-21
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: N/A
AEROSPACI score: 0.49 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: Fucose-binding lectin PA-IIL
  Species: Pseudomonas aeruginosa [TaxId:287]
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q9HYN5 (0-113)
  Domains in SCOPe 2.08: d2vuda_
• Chain 'B':
  Compound: Fucose-binding lectin PA-IIL
  Species: Pseudomonas aeruginosa [TaxId:287]
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q9HYN5 (0-113)
  Domains in SCOPe 2.08: d2vudb_
• Chain 'C':
  Compound: Fucose-binding lectin PA-IIL
  Species: Pseudomonas aeruginosa [TaxId:287]
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q9HYN5 (0-113)
  Domains in SCOPe 2.08: d2vudc_
• Chain 'D':
  Compound: Fucose-binding lectin PA-IIL
  Species: Pseudomonas aeruginosa [TaxId:287]
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q9HYN5 (0-113)
  Domains in SCOPe 2.08: d2vudd_
• Heterogens: CA, SO4, FUC, LZ0, HOH

PDB Chain Sequences:

• Chain 'A':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2vudA (A:)
  atqgvftlpantrfgvtafanssgtqtvnvlvnnetaatfsgqstnnavigtqvlnsgss
  gkvqvqvsvngrpsdlvsaqviltnelnfalvgsedgtdndyndavvvinwplg
  

  
  
• Chain 'B':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2vudB (B:)
  atqgvftlpantrfgvtafanssgtqtvnvlvnnetaatfsgqstnnavigtqvlnsgss
  gkvqvqvsvngrpsdlvsaqviltnelnfalvgsedgtdndyndavvvinwplg
  

  
  
• Chain 'C':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2vudC (C:)
  atqgvftlpantrfgvtafanssgtqtvnvlvnnetaatfsgqstnnavigtqvlnsgss
  gkvqvqvsvngrpsdlvsaqviltnelnfalvgsedgtdndyndavvvinwplg
  

  
  
• Chain 'D':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2vudD (D:)
  atqgvftlpantrfgvtafanssgtqtvnvlvnnetaatfsgqstnnavigtqvlnsgss
  gkvqvqvsvngrpsdlvsaqviltnelnfalvgsedgtdndyndavvvinwplg