PDB entry 2qdg

View 2qdg on RCSB PDB site
Description: Fructose-1,6-bisphosphate Schiff base intermediate in FBP aldolase from Leishmania mexicana
Class: lyase
Keywords: beta barrel, aldolase, leishmania, fructose-1, 6-bisphosphate, c-teminal tail, LYASE
Deposited on 2007-06-20, released 2007-08-21
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-10-18, with a file datestamp of 2017-10-13.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: fructose-1,6-bisphosphate aldolase
    Species: Leishmania mexicana [TaxId:5665]
    Gene: ald
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2qdga_
  • Chain 'B':
    Compound: fructose-1,6-bisphosphate aldolase
    Species: Leishmania mexicana [TaxId:5665]
    Gene: ald
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2qdgb_
  • Chain 'C':
    Compound: fructose-1,6-bisphosphate aldolase
    Species: Leishmania mexicana [TaxId:5665]
    Gene: ald
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2qdgc_
  • Chain 'D':
    Compound: fructose-1,6-bisphosphate aldolase
    Species: Leishmania mexicana [TaxId:5665]
    Gene: ald
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2qdgd_
  • Heterogens: PO4, 2FP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2qdgA (A:)
mgsshhhhhhssglvprgshmsrvtvlqsqlpaynrlktpyeseliatvkklttpgkgll
aadesigsctkrfqpiglsnteehrrqyralmleaegfeqyisgvilhdetvgqkasngq
tfpeyltargvvpgiktdmglcpllegaegeqmtegldgyvkrasayykkgcrfckwrnv
ykiqngtvsesavrfnaetlaryailsqmsglvpivepevmidgkhdidtcqrvsehvwr
evvaalqrhgviwegcllkpnmvvpgaesgktaapeqvahytvmtlartmpamlpgvmfl
sgglsevqaseylnainnsplprpyflsfsyaralqssalkawggkesglaagrraflhr
armnsmaqlgkykrsdddasssslyvkgnty

    Sequence, based on observed residues (ATOM records): (download) 
    >2qdgA (A:)
msrvtvlqsqlpaynrlktpyeseliatvkklttpgkgllaadesigsctkrfqpiglsn
teehrrqyralmleaegfeqyisgvilhdetvgqkasngqtfpeyltargvvpgiktdmg
lcpllegaegeqmtegldgyvkrasayykkgcrfckwrnvykiqngtvsesavrfnaetl
aryailsqmsglvpivepevmidgkhdidtcqrvsehvwrevvaalqrhgviwegcllkp
nmvvpgaesgktaapeqvahytvmtlartmpamlpgvmflsgglsevqaseylnainnsp
lprpyflsfsyaralqssalkawggkesglaagrraflhrarmnsmaqlgkykrsdddas
ssslyv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2qdgB (B:)
mgsshhhhhhssglvprgshmsrvtvlqsqlpaynrlktpyeseliatvkklttpgkgll
aadesigsctkrfqpiglsnteehrrqyralmleaegfeqyisgvilhdetvgqkasngq
tfpeyltargvvpgiktdmglcpllegaegeqmtegldgyvkrasayykkgcrfckwrnv
ykiqngtvsesavrfnaetlaryailsqmsglvpivepevmidgkhdidtcqrvsehvwr
evvaalqrhgviwegcllkpnmvvpgaesgktaapeqvahytvmtlartmpamlpgvmfl
sgglsevqaseylnainnsplprpyflsfsyaralqssalkawggkesglaagrraflhr
armnsmaqlgkykrsdddasssslyvkgnty

    Sequence, based on observed residues (ATOM records): (download) 
    >2qdgB (B:)
msrvtvlqsqlpaynrlktpyeseliatvkklttpgkgllaadesigsctkrfqpiglsn
teehrrqyralmleaegfeqyisgvilhdetvgqkasngqtfpeyltargvvpgiktdmg
lcpllegaegeqmtegldgyvkrasayykkgcrfckwrnvykiqngtvsesavrfnaetl
aryailsqmsglvpivepevmidgkhdidtcqrvsehvwrevvaalqrhgviwegcllkp
nmvvpgaesgktaapeqvahytvmtlartmpamlpgvmflsgglsevqaseylnainnsp
lprpyflsfsyaralqssalkawggkesglaagrraflhrarmnsmaqlgkykrsdddas
ssslyv

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2qdgC (C:)
mgsshhhhhhssglvprgshmsrvtvlqsqlpaynrlktpyeseliatvkklttpgkgll
aadesigsctkrfqpiglsnteehrrqyralmleaegfeqyisgvilhdetvgqkasngq
tfpeyltargvvpgiktdmglcpllegaegeqmtegldgyvkrasayykkgcrfckwrnv
ykiqngtvsesavrfnaetlaryailsqmsglvpivepevmidgkhdidtcqrvsehvwr
evvaalqrhgviwegcllkpnmvvpgaesgktaapeqvahytvmtlartmpamlpgvmfl
sgglsevqaseylnainnsplprpyflsfsyaralqssalkawggkesglaagrraflhr
armnsmaqlgkykrsdddasssslyvkgnty

    Sequence, based on observed residues (ATOM records): (download) 
    >2qdgC (C:)
msrvtvlqsqlpaynrlktpyeseliatvkklttpgkgllaadesigsctkrfqpiglsn
teehrrqyralmleaegfeqyisgvilhdetvgqkasngqtfpeyltargvvpgiktdmg
lcpllegaegeqmtegldgyvkrasayykkgcrfckwrnvykiqngtvsesavrfnaetl
aryailsqmsglvpivepevmidgkhdidtcqrvsehvwrevvaalqrhgviwegcllkp
nmvvpgaesgktaapeqvahytvmtlartmpamlpgvmflsgglsevqaseylnainnsp
lprpyflsfsyaralqssalkawggkesglaagrraflhrarmnsmaqlgkykrsddd

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2qdgD (D:)
mgsshhhhhhssglvprgshmsrvtvlqsqlpaynrlktpyeseliatvkklttpgkgll
aadesigsctkrfqpiglsnteehrrqyralmleaegfeqyisgvilhdetvgqkasngq
tfpeyltargvvpgiktdmglcpllegaegeqmtegldgyvkrasayykkgcrfckwrnv
ykiqngtvsesavrfnaetlaryailsqmsglvpivepevmidgkhdidtcqrvsehvwr
evvaalqrhgviwegcllkpnmvvpgaesgktaapeqvahytvmtlartmpamlpgvmfl
sgglsevqaseylnainnsplprpyflsfsyaralqssalkawggkesglaagrraflhr
armnsmaqlgkykrsdddasssslyvkgnty

    Sequence, based on observed residues (ATOM records): (download) 
    >2qdgD (D:)
msrvtvlqsqlpaynrlktpyeseliatvkklttpgkgllaadesigsctkrfqpiglsn
teehrrqyralmleaegfeqyisgvilhdetvgqkasngqtfpeyltargvvpgiktdmg
lcpllegaegeqmtegldgyvkrasayykkgcrfckwrnvykiqngtvsesavrfnaetl
aryailsqmsglvpivepevmidgkhdidtcqrvsehvwrevvaalqrhgviwegcllkp
nmvvpgaesgktaapeqvahytvmtlartmpamlpgvmflsgglsevqaseylnainnsp
lprpyflsfsyaralqssalkawggkesglaagrraflhrarmnsmaqlgkykrsddd