PDB entry 2kem

View 2kem on RCSB PDB site
Description: Extended structure of citidine deaminase domain of APOBEC3G
Class: hydrolase
Keywords: helix, sheet, zinc, nmr, Alternative splicing, Antiviral defense, Cytoplasm, Host-virus interaction, Hydrolase, Metal-binding, Nucleus, Polymorphism, Ubl conjugation
Deposited on 2009-01-30, released 2009-06-02
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-07-07, with a file datestamp of 2009-07-02.
Experiment type: NMR
Resolution: N/A
R-factor: N/A
AEROSPACI score: 0 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA dC->dU-editing enzyme APOBEC-3G
    Species: Homo sapiens [TaxId:9606]
    Gene: APOBEC3G
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9HC16 (8-201)
      • engineered (51)
      • engineered (60)
      • engineered (127)
      • engineered (138)
      • engineered (173)
    Domains in SCOPe 2.06: d2kema_
  • Heterogens: ZN

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2kemA (A:)
gplgspgfeilrhsmdpptftfnfnnepwvrgrhetylcyevermhndtwvklnqrrgfl
anqaphkhgflegrhaelcfldvipfwkldldqdyrvtcftswspcfscaqemakfiskn
khvslciktariyddqgraqeglrtlaeagakisimtysefkhcwdtfvdhqgapfqpwd
gldehsqdlsgrlrailqnqen

    Sequence, based on observed residues (ATOM records): (download) 
    >2kemA (A:)
eilrhsmdpptftfnfnnepwvrgrhetylcyevermhndtwvklnqrrgflanqaphkh
gflegrhaelcfldvipfwkldldqdyrvtcftswspcfscaqemakfisknkhvslcik
tariyddqgraqeglrtlaeagakisimtysefkhcwdtfvdhqgapfqpwdgldehsqd
lsgrlrailqnqen