PDB entry 2jar

View 2jar on RCSB PDB site
Description: crystal structure of d12n variant of mouse cytosolic 5'(3')-deoxyribonucleotidase (cdn) in complex with deoxyuridine 5' -monophosphate
Class: hydrolase
Keywords: nucleotide metabolism, nucleotide-binding, alfa beta fold, metal- binding, transit peptide, hydrolase, cytosolic, magnesium, metal-binding
Deposited on 2006-11-30, released 2007-11-20
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.94 Å
R-factor: 0.158
AEROSPACI score: 0.5 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 5'(3')-deoxyribonucleotidase
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9JM14
      • engineered mutation (11)
    Domains in SCOPe 2.05: d2jara_
  • Heterogens: UMP, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2jarA (A:)
mavkrpvrvlvnmdgvladfesgllqgfrrrfpeephvpleqrrgflaneqygalrpdla
ekvasvyespgfflnlepipgaldalremndmkdtevficttpllkydhcvgekyrwveq
nlgpefveriiltrdktvvmgdlliddkdniqgleetpswehilftcchnqhlalpptrr
rllswsdnwrgiieskrasl

    Sequence, based on observed residues (ATOM records): (download) 
    >2jarA (A:)
krpvrvlvnmdgvladfesgllqgfrrrfpeephvpleqrrgflaneqygalrpdlaekv
asvyespgfflnlepipgaldalremndmkdtevficttpllkydhcvgekyrwveqnlg
pefveriiltrdktvvmgdlliddkdniqgleetpswehilftcchnqhlalpptrrrll
swsdnwrgiieskras