PDB entry 2hbj
View 2hbj on RCSB PDB site
Description: Structure of the yeast nuclear exosome component, Rrp6p, reveals an interplay between the active site and the HRDC domain
Class: hydrolase, gene regulation
Keywords: exosome, RNA metabolism, RNA surveillance, RNA processing, HYDROLASE, GENE REGULATION
Deposited on
2006-06-14, released
2006-07-25
The last revision prior to the SCOPe 2.05 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.232
AEROSPACI score: 0.36
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Exosome complex exonuclease RRP6
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: RRP6
Database cross-references and differences (RAF-indexed):
- Uniprot Q12149 (2-End)
- cloning artifact (0-1)
- engineered (234)
Domains in SCOPe 2.05: d2hbja1, d2hbja2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2hbjA (A:)
gmvekpqlkfkspidnseshpfipllkekpnalkplseslrlvdddennpshyphpyeye
idhqeyspeilqireeipskswddsvpiwvdtstelesmledlkntkeiavdlehhdyrs
yygivclmqistrerdylvdtlklrenlhilnevftnpsivkvfhgafmdiiwlqrdlgl
yvvglfdtyhaskaiglprhslayllenfanfktskkyqladwrirplskpmtaaaradt
hfllniydqlrnkliesnklagvlyesrnvakrrfeyskyrpltpssevyspiekespwk
ilmyqynipperevlvrelyqwrdliarrddesprfvmpnqllaalvaytptdvigvvsl
tngvtehvrqnakllanlirdalrnikntneeatpipssetkadgillet
Sequence, based on observed residues (ATOM records): (download)
>2hbjA (A:)
gmvekpqlkfkspidnseshpfipllkekpnalkplseslrlvdddennpshyphpyeye
idhqeyspeilqireeipskswddsvpiwvdtstelesmledlkntkeiavdlehhdyrs
yygivclmqistrerdylvdtlklrenlhilnevftnpsivkvfhgafmdiiwlqrdlgl
yvvglfdtyhaskaiglprhslayllenfanfktskkyqladwrirplskpmtaaaradt
hfllniydqlrnkliesnklagvlyesrnvakrrfeyskyrpltpssevyspiekespwk
ilmyqynipperevlvrelyqwrdliarrddesprfvmpnqllaalvaytptdvigvvsl
tngvtehvrqnakllanlirdalrnikntn