PDB entry 2d04

View 2d04 on RCSB PDB site
Description: Crystal structure of neoculin, a sweet protein with taste-modifying activity.
Class: plant protein
Keywords: all beta, PLANT PROTEIN
Deposited on 2005-07-25, released 2006-06-20
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.76 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: neoculin acidic subunit
    Species: Curculigo latifolia [TaxId:4676]
    Database cross-references and differences (RAF-indexed):
    • GB BAD29946 (0-End)
    Domains in SCOPe 2.08: d2d04a_
  • Chain 'B':
    Compound: Curculin
    Species: Curculigo latifolia [TaxId:4676]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2d04b_
  • Chain 'C':
    Compound: neoculin acidic subunit
    Species: Curculigo latifolia [TaxId:4676]
    Database cross-references and differences (RAF-indexed):
    • GB BAD29946 (0-112)
    Domains in SCOPe 2.08: d2d04c_
  • Chain 'D':
    Compound: Curculin
    Species: Curculigo latifolia [TaxId:4676]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2d04d_
  • Chain 'E':
    Compound: neoculin acidic subunit
    Species: Curculigo latifolia [TaxId:4676]
    Database cross-references and differences (RAF-indexed):
    • GB BAD29946 (0-End)
    Domains in SCOPe 2.08: d2d04e_
  • Chain 'F':
    Compound: Curculin
    Species: Curculigo latifolia [TaxId:4676]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2d04f_
  • Chain 'G':
    Compound: neoculin acidic subunit
    Species: Curculigo latifolia [TaxId:4676]
    Database cross-references and differences (RAF-indexed):
    • GB BAD29946 (0-End)
    Domains in SCOPe 2.08: d2d04g_
  • Chain 'H':
    Compound: Curculin
    Species: Curculigo latifolia [TaxId:4676]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2d04h_
  • Heterogens: NAG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2d04A (A:)
dsvllsgqtlyaghsltsgsytltiqnncnlvkyqhgrqiwasdtdgqgsqcrltlrsdg
nliiyddnnmvvwgsdcwgnngtyalvlqqdglfviygpvlwplglngcrsln

    Sequence, based on observed residues (ATOM records): (download) 
    >2d04A (A:)
dsvllsgqtlyaghsltsgsytltiqnncnlvkyqhgrqiwasdtdgqgsqcrltlrsdg
nliiyddnnmvvwgsdcwgnngtyalvlqqdglfviygpvlwplglngcrs

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2d04B (B:)
dnvllsgqtlhadhslqagaytltiqnkcnlvkyqngrqiwasntdrrgsgcrltllsdg
nlviydhnnndvwgsacwgdngkyalvlqkdgrfviygpvlwslgpngcrrvng

    Sequence, based on observed residues (ATOM records): (download) 
    >2d04B (B:)
dnvllsgqtlhadhslqagaytltiqnkcnlvkyqngrqiwasntdrrgsgcrltllsdg
nlviydhnnndvwgsacwgdngkyalvlqkdgrfviygpvlwslgpngcrr

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2d04C (C:)
dsvllsgqtlyaghsltsgsytltiqnncnlvkyqhgrqiwasdtdgqgsqcrltlrsdg
nliiyddnnmvvwgsdcwgnngtyalvlqqdglfviygpvlwplglngcrsln

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2d04D (D:)
dnvllsgqtlhadhslqagaytltiqnkcnlvkyqngrqiwasntdrrgsgcrltllsdg
nlviydhnnndvwgsacwgdngkyalvlqkdgrfviygpvlwslgpngcrrvng

    Sequence, based on observed residues (ATOM records): (download) 
    >2d04D (D:)
dnvllsgqtlhadhslqagaytltiqnkcnlvkyqngrqiwasntdrrgsgcrltllsdg
nlviydhnnndvwgsacwgdngkyalvlqkdgrfviygpvlwslgpngcrr

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2d04E (E:)
dsvllsgqtlyaghsltsgsytltiqnncnlvkyqhgrqiwasdtdgqgsqcrltlrsdg
nliiyddnnmvvwgsdcwgnngtyalvlqqdglfviygpvlwplglngcrsln

    Sequence, based on observed residues (ATOM records): (download) 
    >2d04E (E:)
dsvllsgqtlyaghsltsgsytltiqnncnlvkyqhgrqiwasdtdgqgsqcrltlrsdg
nliiyddnnmvvwgsdcwgnngtyalvlqqdglfviygpvlwplglngcrs

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >2d04F (F:)
dnvllsgqtlhadhslqagaytltiqnkcnlvkyqngrqiwasntdrrgsgcrltllsdg
nlviydhnnndvwgsacwgdngkyalvlqkdgrfviygpvlwslgpngcrrvng

    Sequence, based on observed residues (ATOM records): (download) 
    >2d04F (F:)
dnvllsgqtlhadhslqagaytltiqnkcnlvkyqngrqiwasntdrrgsgcrltllsdg
nlviydhnnndvwgsacwgdngkyalvlqkdgrfviygpvlwslgpngcr

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >2d04G (G:)
dsvllsgqtlyaghsltsgsytltiqnncnlvkyqhgrqiwasdtdgqgsqcrltlrsdg
nliiyddnnmvvwgsdcwgnngtyalvlqqdglfviygpvlwplglngcrsln

    Sequence, based on observed residues (ATOM records): (download) 
    >2d04G (G:)
dsvllsgqtlyaghsltsgsytltiqnncnlvkyqhgrqiwasdtdgqgsqcrltlrsdg
nliiyddnnmvvwgsdcwgnngtyalvlqqdglfviygpvlwplglngcr

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >2d04H (H:)
dnvllsgqtlhadhslqagaytltiqnkcnlvkyqngrqiwasntdrrgsgcrltllsdg
nlviydhnnndvwgsacwgdngkyalvlqkdgrfviygpvlwslgpngcrrvng

    Sequence, based on observed residues (ATOM records): (download) 
    >2d04H (H:)
dnvllsgqtlhadhslqagaytltiqnkcnlvkyqngrqiwasntdrrgsgcrltllsdg
nlviydhnnndvwgsacwgdngkyalvlqkdgrfviygpvlwslgpngcrr