PDB entry 2b5u

View 2b5u on RCSB PDB site
Description: Crystal Structure Of Colicin E3 V206C Mutant In Complex With Its Immunity Protein
Class: ribosome inhibitor, hydrolase
Keywords: High resolution crystal structure, Colicin E3, Immunity Protein, Ribosome inactivation, RIBOSOME INHIBITOR, HYDROLASE
Deposited on 2005-09-29, released 2006-11-07
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.259
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Colicin E3
    Species: Escherichia coli [TaxId:562]
    Gene: ceaC
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00646 (Start-550)
      • engineered (205)
    Domains in SCOPe 2.05: d2b5ua1, d2b5ua2, d2b5ua3
  • Chain 'B':
    Compound: Colicin E3 immunity protein
    Species: Escherichia coli [TaxId:562]
    Gene: imm, ceiC, immB
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d2b5ub_
  • Chain 'C':
    Compound: Colicin E3
    Species: Escherichia coli [TaxId:562]
    Gene: ceaC
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00646 (Start-550)
      • engineered (205)
    Domains in SCOPe 2.05: d2b5uc1, d2b5uc2, d2b5uc3
  • Chain 'D':
    Compound: Colicin E3 immunity protein
    Species: Escherichia coli [TaxId:562]
    Gene: imm, ceiC, immB
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d2b5ud_
  • Heterogens: CIT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2b5uA (A:)
msggdgrghntgahstsgninggptglgvgggasdgsgwssennpwgggsgsgihwgggs
ghgngggngnsgggsgtggnlsavaapvafgfpalstpgagglavsisagalsaaiadim
aalkgpfkfglwgvalygvlpsqiakddpnmmskivtslpadditespvsslpldkatvn
vnvrvvddvkderqnisvvsgvpmscpvvdakpterpgvftasipgapvlnisvnnstpa
vqtlspgvtnntdkdvrpagftqggntrdavirfpkdsghnavyvsvsdvlspdqvkqrq
deenrrqqewdathpveaaernyeraraelnqanedvarnqerqakavqvynsrkselda
anktladaiaeikqfnrfahdpmagghrmwqmaglkaqraqtdvnnkqaafdaaakeksd
adaalssamesrkkkedkkrsaennlndeknkprkgfkdyghdyhpapktenikglgdlk
pgipktpkqngggkrkrwtgdkgrkiyewdsqhgelegyrasdgqhlgsfdpktgnqlkg
pdpkrnikkyl

    Sequence, based on observed residues (ATOM records): (download) 
    >2b5uA (A:)
savaapvafgfpalstpgagglavsisagalsaaiadimaalkgpfkfglwgvalygvlp
sqiakddpnmmskivtslpadditespvsslpldkatvnvnvrvvddvkderqnisvvsg
vpmscpvvdakpterpgvftasipgapvlnisvnnstpavqtlspgvtnntdkdvrpagf
tqggntrdavirfpkdsghnavyvsvsdvlspdqvkqrqdeenrrqqewdathpveaaer
nyeraraelnqanedvarnqerqakavqvynsrkseldaanktladaiaeikqfnrfahd
pmagghrmwqmaglkaqraqtdvnnkqaafdaaakeksdadaalssamesrkkkedkkrs
aennlndeknkprkgfkdyghdyhpapktenikglgdlkpgipktpkqngggkrkrwtgd
kgrkiyewdsqhgelegyrasdgqhlgsfdpktgnqlkgpdpkrnikkyl

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2b5uB (B:)
glkldltwfdkstedfkgeeyskdfgddgsvmeslgvpfkdnvnngcfdviaewvpllqp
yfnhqidisdneyfvsfdyrdgdw

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2b5uC (C:)
msggdgrghntgahstsgninggptglgvgggasdgsgwssennpwgggsgsgihwgggs
ghgngggngnsgggsgtggnlsavaapvafgfpalstpgagglavsisagalsaaiadim
aalkgpfkfglwgvalygvlpsqiakddpnmmskivtslpadditespvsslpldkatvn
vnvrvvddvkderqnisvvsgvpmscpvvdakpterpgvftasipgapvlnisvnnstpa
vqtlspgvtnntdkdvrpagftqggntrdavirfpkdsghnavyvsvsdvlspdqvkqrq
deenrrqqewdathpveaaernyeraraelnqanedvarnqerqakavqvynsrkselda
anktladaiaeikqfnrfahdpmagghrmwqmaglkaqraqtdvnnkqaafdaaakeksd
adaalssamesrkkkedkkrsaennlndeknkprkgfkdyghdyhpapktenikglgdlk
pgipktpkqngggkrkrwtgdkgrkiyewdsqhgelegyrasdgqhlgsfdpktgnqlkg
pdpkrnikkyl

    Sequence, based on observed residues (ATOM records): (download) 
    >2b5uC (C:)
savaapvafgfpalstpgagglavsisagalsaaiadimaalkgpfkfglwgvalygvlp
sqiakddpnmmskivtslpadditespvsslpldkatvnvnvrvvddvkderqnisvvsg
vpmscpvvdakpterpgvftasipgapvlnisvnnstpavqtlspgvtnntdkdvrpagf
tqggntrdavirfpkdsghnavyvsvsdvlspdqvkqrqdeenrrqqewdathpveaaer
nyeraraelnqanedvarnqerqakavqvynsrkseldaanktladaiaeikqfnrfahd
pmagghrmwqmaglkaqraqtdvnnkqaafdaaakeksdadaalssamesrkkkedkkrs
aennlndeknkprkgfkdyghdyhpapktenikglgdlkpgipktpkqngggkrkrwtgd
kgrkiyewdsqhgelegyrasdgqhlgsfdpktgnqlkgpdpkrnikkyl

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2b5uD (D:)
glkldltwfdkstedfkgeeyskdfgddgsvmeslgvpfkdnvnngcfdviaewvpllqp
yfnhqidisdneyfvsfdyrdgdw