PDB entry 2atp

View 2atp on RCSB PDB site
Description: Crystal structure of a CD8ab heterodimer
Class: immune system
Keywords: CD8ab, CD8aa, MHC, IMMUNE SYSTEM
Deposited on 2005-08-25, released 2005-12-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: T-cell surface glycoprotein CD8 alpha chain
    Species: Mus musculus [TaxId:10090]
    Gene: Cd8a, Lyt-2, Lyt2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2atpa_
  • Chain 'B':
    Compound: T-cell surface glycoprotein CD8 beta chain
    Species: Mus musculus [TaxId:10090]
    Gene: Cd8b, Lyt-3, Lyt3
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2atpb1
  • Chain 'C':
    Compound: T-cell surface glycoprotein CD8 alpha chain
    Species: Mus musculus [TaxId:10090]
    Gene: Cd8a, Lyt-2, Lyt2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2atpc_
  • Chain 'D':
    Compound: T-cell surface glycoprotein CD8 beta chain
    Species: Mus musculus [TaxId:10090]
    Gene: Cd8b, Lyt-3, Lyt3
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2atpd_
  • Chain 'E':
    Compound: artifact linker
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 2ATP (Start-28)
  • Chain 'F':
    Compound: artifact linker
    Species: synthetic, synthetic
    Database cross-references and differences (RAF-indexed):
    • PDB 2ATP (Start-28)
  • Heterogens: NAG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2atpA (A:)
kpqapelrifpkkmdaelgqkvdlvcevlgsvsqgcswlfqnsssklpqptfvvymassh
nkitwdeklnssklfsamrdtnnkyvltlnkfskenegyyfcsvisnsvmyfssvvpvlq
kv

    Sequence, based on observed residues (ATOM records): (download) 
    >2atpA (A:)
apelrifpkkmdaelgqkvdlvcevlgsvsqgcswlfqnsssklpqptfvvymasshnki
twdeklnssklfsamrdtnnkyvltlnkfskenegyyfcsvisnsvmyfssvvpvlqk

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2atpB (B:)
liqtpssllvqtnhtakmscevksiskltsiywlrerqdpkdkyfeflaswssskgvlyg
esvdkkrniilessdsrrpflsimnvkpedsdfyfcatvgspkmvfgtgtkltvv

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2atpC (C:)
kpqapelrifpkkmdaelgqkvdlvcevlgsvsqgcswlfqnsssklpqptfvvymassh
nkitwdeklnssklfsamrdtnnkyvltlnkfskenegyyfcsvisnsvmyfssvvpvlq
kv

    Sequence, based on observed residues (ATOM records): (download) 
    >2atpC (C:)
apelrifpkkmdaelgqkvdlvcevlgsvsqgcswlfqnsssklpqptfvvymasshnki
twdeklnssklfsamrdtnnkyvltlnkfskenegyyfcsvisnsvmyfssvvpvlqkv

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2atpD (D:)
liqtpssllvqtnhtakmscevksiskltsiywlrerqdpkdkyfeflaswssskgvlyg
esvdkkrniilessdsrrpflsimnvkpedsdfyfcatvgspkmvfgtgtkltvv

    Sequence, based on observed residues (ATOM records): (download) 
    >2atpD (D:)
liqtpssllvqtnhtakmscevksissiywlrerqdpkdkyfeflaswssskgvlygesv
dkkrniilessdsrrpflsimnvkpedsdfyfcatvgspkmvfgtgtkltvv

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.