PDB entry 2a6a

View 2a6a on RCSB PDB site
Description: Crystal structure of Glycoprotein endopeptidase (tm0874) from THERMOTOGA MARITIMA at 2.50 A resolution
Class: hydrolase
Keywords: tm0874, Glycoprotein endopeptidase, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI
Deposited on 2005-07-02, released 2005-07-19
The last revision prior to the SCOP 1.75 freeze date was dated 2005-07-19, with a file datestamp of 2007-06-28.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.191
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: hypothetical protein TM0874
    Species: Thermotoga maritima MSB8
    Gene: tm0874
    Database cross-references and differences (RAF-indexed):
    • GB NP_228682 (12-End)
      • modified residue (12)
      • modified residue (107)
    Domains in SCOP 1.75: d2a6aa1, d2a6aa2
  • Chain 'B':
    Compound: hypothetical protein TM0874
    Species: Thermotoga maritima MSB8
    Gene: tm0874
    Database cross-references and differences (RAF-indexed):
    • GB NP_228682 (12-End)
      • leader sequence (11)
      • modified residue (12)
      • modified residue (107)
    Domains in SCOP 1.75: d2a6ab1, d2a6ab2
  • Heterogens: UNL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2a6aA (A:)
mgsdkihhhhhhmnvlaldtsqririglrkgedlfeisytgekkhaeilpvvvkklldel
dlkvkdldvvgvgigpggltglrvgiatvvglvspydipvaplnsfemtakscpadgvvl
varrarkgyhycavylkdkglnplkepsvvsdeeleeitkefspkivlkddllispavlv
eeserlfrekktihyyeieplylqksiaelnwekkkrg

    Sequence, based on observed residues (ATOM records): (download) 
    >2a6aA (A:)
mnvlaldtsqririglrkgedlfeisytgekkhaeilpvvvkklldeldlkvkdldvvgv
gigpggltglrvgiatvvglvspydipvaplnsfemtakscpadgvvlvarrarkgyhyc
avylkdkglnplkepsvvsdeeleeitkefspkivlkddllispavlveeserlfrekkt
ihyyeieplylqk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2a6aB (B:)
mgsdkihhhhhhmnvlaldtsqririglrkgedlfeisytgekkhaeilpvvvkklldel
dlkvkdldvvgvgigpggltglrvgiatvvglvspydipvaplnsfemtakscpadgvvl
varrarkgyhycavylkdkglnplkepsvvsdeeleeitkefspkivlkddllispavlv
eeserlfrekktihyyeieplylqksiaelnwekkkrg

    Sequence, based on observed residues (ATOM records): (download) 
    >2a6aB (B:)
hmnvlaldtsqririglrkgedlfeisytgekkhaeilpvvvkklldeldlkvkdldvvg
vgigpggltglrvgiatvvglvspydipvaplnsfemtakscpadgvvlvarrarkgyhy
cavylkdkglnplkepsvvsdeeleeitkefspkivlkddllispavlveeserlfrekk
tihyyeie