PDB entry 1yb4
View 1yb4 on RCSB PDB site
Description: Crystal Structure of the Tartronic Semialdehyde Reductase from Salmonella typhimurium LT2
Class: oxidoreductase
Keywords: Structural Genomics, Tartronic Semialdehyde Reductase, Oxidoreductase, Salmonella typhimurium LT2, PSI, Protein Structure Initiative, The Midwest Center for Structural Genomics, MCSG
Deposited on
2004-12-20, released
2005-02-01
The last revision prior to the SCOPe 2.05 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.229
AEROSPACI score: 0.3
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: tartronic semialdehyde reductase
Species: SALMONELLA TYPHIMURIUM [TaxId:99287]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8ZR83 (3-End)
- modified residue (3)
- modified residue (13)
- modified residue (17)
- modified residue (64)
- modified residue (94)
- modified residue (112)
- modified residue (136)
- modified residue (207)
- modified residue (223)
- modified residue (281)
- modified residue (288)
Domains in SCOPe 2.05: d1yb4a1, d1yb4a2 - Chain 'B':
Compound: tartronic semialdehyde reductase
Species: SALMONELLA TYPHIMURIUM [TaxId:99287]
Database cross-references and differences (RAF-indexed):
- Uniprot Q8ZR83 (3-End)
- modified residue (3)
- modified residue (13)
- modified residue (17)
- modified residue (64)
- modified residue (94)
- modified residue (112)
- modified residue (136)
- modified residue (207)
- modified residue (223)
- modified residue (281)
- modified residue (288)
Domains in SCOPe 2.05: d1yb4b1, d1yb4b2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1yb4A (A:)
snamklgfiglgimgspmainlaraghqlhvttigpvadellslgavnvetarqvtefad
iifimvpdtpqvedvlfgehgcaktslqgktivdmssispietkrfaqrvnemgadylda
pvsggeigaregtlsimvggeqkvfdrvkplfdilgknitlvggngdgqtckvanqiiva
lnieavsealvfaskagadpvrvrqalmggfassrilevhgerminrtfepgfkialhqk
dlnlalqsakalalnlpntatcqelfntcaanggsqldhsamvqalelmanhkls
Sequence, based on observed residues (ATOM records): (download)
>1yb4A (A:)
mklgfiglgimgspmainlaraghqlhvttigpvadellslgavnvetarqvtefadiif
imvpdtpqvedvlfgehgcaktslqgktivdmssispietkrfaqrvnemgadyldapvs
ggeigaregtlsimvggeqkvfdrvkplfdilgknitlvggngdgqtckvanqiivalni
eavsealvfaskagadpvrvrqalmggfassrilevhgerminrtfepgfkialhqkdln
lalqsakalalnlpntatcqelfntcaanggsqldhsamvqalelmanhkl
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1yb4B (B:)
snamklgfiglgimgspmainlaraghqlhvttigpvadellslgavnvetarqvtefad
iifimvpdtpqvedvlfgehgcaktslqgktivdmssispietkrfaqrvnemgadylda
pvsggeigaregtlsimvggeqkvfdrvkplfdilgknitlvggngdgqtckvanqiiva
lnieavsealvfaskagadpvrvrqalmggfassrilevhgerminrtfepgfkialhqk
dlnlalqsakalalnlpntatcqelfntcaanggsqldhsamvqalelmanhkls
Sequence, based on observed residues (ATOM records): (download)
>1yb4B (B:)
mklgfiglgimgspmainlaraghqlhvttigpvadellslgavnvetarqvtefadiif
imvpdtpqvedvlfgehgcaktslqgktivdmssispietkrfaqrvnemgadyldapvs
ggeigaregtlsimvggeqkvfdrvkplfdilgknitlvggngdgqtckvanqiivalni
eavsealvfaskagadpvrvrqalmggfassrilevhgerminrtfepgfkialhqkdln
lalqsakalalnlpntatcqelfntcaanggsqldhsamvqalelmanhkl