PDB entry 1u5t

View 1u5t on RCSB PDB site
Description: Structure of the ESCRT-II endosomal trafficking complex
Class: transport protein
Keywords: escrt, endosomal, trafficking, protein complex, TRANSPORT PROTEIN
Deposited on 2004-07-28, released 2004-09-21
The last revision prior to the SCOPe 2.04 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 3.6 Å
R-factor: 0.226
AEROSPACI score: 0.05 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: appears to be functionally related to SNF7; Snf8p
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d1u5ta1, d1u5ta2
  • Chain 'B':
    Compound: Defective in vacuolar protein sorting; Vps36p
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d1u5tb1, d1u5tb2
  • Chain 'C':
    Compound: Hypothetical 23.6 kDa protein in YUH1-URA8 intergenic region
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d1u5tc1, d1u5tc2
  • Chain 'D':
    Compound: Hypothetical 23.6 kDa protein in YUH1-URA8 intergenic region
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d1u5td1, d1u5td2

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1u5tA (A:)
mkqfglaafdelkdgkyndvnktilekqsvelrdqlmvfqerlvefakkhnselqaspef
rskfmhmcssigidplslfdrdkhlftvndfyyevclkvieicrqtkdmnggvisfqele
kvhfrklnvglddleksidmlkslecfeifqirgkkflrsvpneltsdqtkileicsilg
yssisllkanlgweavrsksaldemvangllwidyqggaealywdpswitrql

    Sequence, based on observed residues (ATOM records): (download) 
    >1u5tA (A:)
vnktilekqsvelrdqlmvfqerlvefakkhnselqaspefrskfmhmcssigidplslf
drdkhlftvndfyyevclkvieicrqtkdmnggvisfqelekvhfrklnvglddleksid
mlkslecfeifqirgkkflrsvpneltsdqtkileicsilgyssisllkanlgweavrsk
saldemvangllwidyqggaealywdpswitrq

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1u5tB (B:)
ldrekflnkelfldeiareiyeftlsefkdlnsdtnymiitlvdlyamynksmrigtgli
spmemreacerfehlglnelklvkvnkrilcvtsekfdvvkeklvdligdnpgsdllrlt
qilssnnsksnwtlgilmevlqncvdegdllidkqlsgiyyyknsywps

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1u5tC (C:)
msalppvysfpplytrqpnsltrrqqistwidiisqycktkkiwymsvdgtvindnelds
gstdnddskkisknlfnnediqrsvsqvfideiwsqmtkegkclpidqsgrrssnttttr
yfilwksldswaslilqwfedsgklnqvitlyelsegdetvnwefhrmpesllyyclkpl
cdrnratmlkdendkviaikvv

    Sequence, based on observed residues (ATOM records): (download) 
    >1u5tC (C:)
salppvysfpplytrqpnsltrrqqistwidiisqycktkkiwymsvdgtsknlfnnedi
qrsvsqvfideiwsqmtkegkclpidqsgrrssnttttryfilwksldswaslilqwfed
sgklnqvitlyelsegdetvnwefhrmpesllyyclkplcdrnratmlkdendkviai

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1u5tD (D:)
msalppvysfpplytrqpnsltrrqqistwidiisqycktkkiwymsvdgtvindnelds
gstdnddskkisknlfnnediqrsvsqvfideiwsqmtkegkclpidqsgrrssnttttr
yfilwksldswaslilqwfedsgklnqvitlyelsegdetvnwefhrmpesllyyclkpl
cdrnratmlkdendkviaikvv

    Sequence, based on observed residues (ATOM records): (download) 
    >1u5tD (D:)
salppvysfpplytrqpnsltrrqqistwidiisqycktkkiwymsvdgtsknlfnnedi
qrsvsqvfideiwsqmtkegkclpidqsgrrssnttttryfilwksldswaslilqwfed
sgklnqvitlyelsegdetvnwefhrmpesllyyclkplcdrnratmlkdendkviai