PDB entry 1tu4
View 1tu4 on RCSB PDB site
Description: Crystal Structure of Rab5-GDP Complex
Class: protein transport
Keywords: rab5, gtpase, protein transport
Deposited on
2004-06-24, released
2004-10-05
The last revision prior to the SCOPe 2.02 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.217
AEROSPACI score: 0.35
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Ras-related protein Rab-5A
Species: Homo sapiens [TaxId:9606]
Gene: RAB5A, RAB5
Database cross-references and differences (RAF-indexed):
- Uniprot P20339 (1-End)
- modified residue (74)
- modified residue (146)
- modified residue (154)
- modified residue (161)
Domains in SCOPe 2.02: d1tu4a_ - Chain 'B':
Compound: Ras-related protein Rab-5A
Species: Homo sapiens [TaxId:9606]
Gene: RAB5A, RAB5
Database cross-references and differences (RAF-indexed):
- Uniprot P20339
- modified residue (74)
- modified residue (146)
- modified residue (154)
- modified residue (161)
Domains in SCOPe 2.02: d1tu4b_ - Chain 'C':
Compound: Ras-related protein Rab-5A
Species: Homo sapiens [TaxId:9606]
Gene: RAB5A, RAB5
Database cross-references and differences (RAF-indexed):
- Uniprot P20339 (1-End)
- modified residue (74)
- modified residue (146)
- modified residue (154)
- modified residue (161)
Domains in SCOPe 2.02: d1tu4c_ - Chain 'D':
Compound: Ras-related protein Rab-5A
Species: Homo sapiens [TaxId:9606]
Gene: RAB5A, RAB5
Database cross-references and differences (RAF-indexed):
- Uniprot P20339
- modified residue (74)
- modified residue (146)
- modified residue (154)
- modified residue (161)
Domains in SCOPe 2.02: d1tu4d_ - Heterogens: CO, SO4, GDP, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1tu4A (A:)
mgnkicqfklvllgesavgksslvlrfvkgqfhefqestigaafltqtvclddttvkfei
wdtagqeryhslapmyyrgaqaaivvyditneesfaraknwvkelqrqaspnivialsgn
kadlankravdfqeaqsyaddnsllfmetsaktsmnvneifmaiakklpkn
Sequence, based on observed residues (ATOM records): (download)
>1tu4A (A:)
gnkicqfklvllgesavgksslvlrfvkgqfhefqestigaafltqtvclddttvkfeiw
dtagqeryhslapmyyrgaqaaivvyditneesfaraknwvkelqrqaspnivialsgnk
adlankravdfqeaqsyaddnsllfmetsaktsmnvneifmaiakklpk
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1tu4B (B:)
mgnkicqfklvllgesavgksslvlrfvkgqfhefqestigaafltqtvclddttvkfei
wdtagqeryhslapmyyrgaqaaivvyditneesfaraknwvkelqrqaspnivialsgn
kadlankravdfqeaqsyaddnsllfmetsaktsmnvneifmaiakklpkn
Sequence, based on observed residues (ATOM records): (download)
>1tu4B (B:)
icqfklvllgesavgksslvlrfvkgqfqestigaafltqtvclddttvkfeiwdtagqe
ryhslapmyyrgaqaaivvyditneesfaraknwvkelqrqaspnivialsgnkadlank
ravdfqeaqsyaddnsllfmetsaktsmnvneifmaiakklp
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1tu4C (C:)
mgnkicqfklvllgesavgksslvlrfvkgqfhefqestigaafltqtvclddttvkfei
wdtagqeryhslapmyyrgaqaaivvyditneesfaraknwvkelqrqaspnivialsgn
kadlankravdfqeaqsyaddnsllfmetsaktsmnvneifmaiakklpkn
Sequence, based on observed residues (ATOM records): (download)
>1tu4C (C:)
gnkicqfklvllgesavgksslvlrfvkgqfhefqestigaafltqtvclddttvkfeiw
dtagqeryhslapmyyrgaqaaivvyditneesfaraknwvkelqrqaspnivialsgnk
adlankravdfqeaqsyaddnsllfmetsaktsmnvneifmaiakklpk
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1tu4D (D:)
mgnkicqfklvllgesavgksslvlrfvkgqfhefqestigaafltqtvclddttvkfei
wdtagqeryhslapmyyrgaqaaivvyditneesfaraknwvkelqrqaspnivialsgn
kadlankravdfqeaqsyaddnsllfmetsaktsmnvneifmaiakklpkn
Sequence, based on observed residues (ATOM records): (download)
>1tu4D (D:)
nkicqfklvllgesavgksslvlrfvkgqfhestigaafltqtvclddttvkfeiwdtag
qeryhslapmyyrgaqaaivvyditneesfaraknwvkelqrqaspnivialsgnkadla
nkravdfqeaqsyaddnsllfmetsaktsmnvneifmaiakklp