PDB entry 1rp3

View 1rp3 on RCSB PDB site
Description: Cocrystal structure of the flagellar sigma/anti-sigma complex, Sigma-28/FlgM
Class: transcription
Keywords: transcription, sigma factor
Deposited on 2003-12-02, released 2004-04-06
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-07-24, with a file datestamp of 2019-07-19.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: RNA polymerase sigma factor SIGMA-28 (FliA)
    Species: Aquifex aeolicus [TaxId:63363]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O67268 (3-End)
      • cloning artifact (2)
    Domains in SCOPe 2.08: d1rp3a1, d1rp3a2, d1rp3a3, d1rp3a4
  • Chain 'B':
    Compound: anti sigma factor FlgM
    Species: Aquifex aeolicus [TaxId:63363]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1rp3b_
  • Chain 'C':
    Compound: RNA polymerase sigma factor SIGMA-28 (FliA)
    Species: Aquifex aeolicus [TaxId:63363]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1rp3c1, d1rp3c2, d1rp3c3
  • Chain 'D':
    Compound: anti sigma factor FlgM
    Species: Aquifex aeolicus [TaxId:63363]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1rp3d_
  • Chain 'E':
    Compound: RNA polymerase sigma factor SIGMA-28 (FliA)
    Species: Aquifex aeolicus [TaxId:63363]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1rp3e1, d1rp3e2, d1rp3e3
  • Chain 'F':
    Compound: anti sigma factor FlgM
    Species: Aquifex aeolicus [TaxId:63363]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1rp3f_
  • Chain 'G':
    Compound: RNA polymerase sigma factor SIGMA-28 (FliA)
    Species: Aquifex aeolicus [TaxId:63363]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1rp3g1, d1rp3g2, d1rp3g3
  • Chain 'H':
    Compound: anti sigma factor FlgM
    Species: Aquifex aeolicus [TaxId:63363]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1rp3h_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1rp3A (A:)
gshmknpysnqiereelilkylplvkaiatnikkhlpedvdirdlisygviglikavdnl
stenpkraeayiklrikgaiydylrsldfgsrqvrekerrikevveklkeklgreptdee
vakelgisteelfktldkinfsyilsleevfrdfardyselipsstnveeevikreltek
vkeavsklpereklviqlifyeelpakevakiletsvsrvsqlkakalerlremlsnpl

    Sequence, based on observed residues (ATOM records): (download) 
    >1rp3A (A:)
hmknpysnqiereelilkylplvkaiatnikkhlpedvdirdlisygviglikavdnlst
enpkraeayiklrikgaiydylrsldfgsrqvrekerrikevveklkeklgreptdeeva
kelgisteelfktldkinfsyilsleevfrdfardyselipsstnveeevikreltekvk
eavsklpereklviqlifyeelpakevakiletsvsrvsqlkakalerlremlsn

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1rp3B (B:)
mvnrielsrligllletekrknteqkesgtnkiedkvtlskiaqelskndveekdlekkv
kelkekiekgeyevsdekvvkgliefft

    Sequence, based on observed residues (ATOM records): (download) 
    >1rp3B (B:)
vnrielsrligllletsgtnkiedkvtlskiaqelskndveekdlekkvkelkekiekge
yevsdekvvkgliefft

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1rp3C (C:)
gshmknpysnqiereelilkylplvkaiatnikkhlpedvdirdlisygviglikavdnl
stenpkraeayiklrikgaiydylrsldfgsrqvrekerrikevveklkeklgreptdee
vakelgisteelfktldkinfsyilsleevfrdfardyselipsstnveeevikreltek
vkeavsklpereklviqlifyeelpakevakiletsvsrvsqlkakalerlremlsnpl

    Sequence, based on observed residues (ATOM records): (download) 
    >1rp3C (C:)
knpysnqiereelilkylplvkaiatnikkhlpedvdirdlisygviglikavdnlsten
pkraeayiklrikgaiydylrsldfgsrqvrekerrikevveklkeklgreptdeevake
lgisteelfktldkinfsyilsleevfrdfardyselipsstnveeevikreltekvkea
vsklpereklviqlifyeelpakevakiletsvsrvsqlkakalerlremlsnp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1rp3D (D:)
mvnrielsrligllletekrknteqkesgtnkiedkvtlskiaqelskndveekdlekkv
kelkekiekgeyevsdekvvkgliefft

    Sequence, based on observed residues (ATOM records): (download) 
    >1rp3D (D:)
nrielsrligllletedkvtlskiaqelskndveekdlekkvkelkekiekgeyevsdek
vvkgliefft

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1rp3E (E:)
gshmknpysnqiereelilkylplvkaiatnikkhlpedvdirdlisygviglikavdnl
stenpkraeayiklrikgaiydylrsldfgsrqvrekerrikevveklkeklgreptdee
vakelgisteelfktldkinfsyilsleevfrdfardyselipsstnveeevikreltek
vkeavsklpereklviqlifyeelpakevakiletsvsrvsqlkakalerlremlsnpl

    Sequence, based on observed residues (ATOM records): (download) 
    >1rp3E (E:)
knpysnqiereelilkylplvkaiatnikkhlpedvdirdlisygviglikavdnlsten
pkraeayiklrikgaiydylrsldfgsrqvrekerrikevveklkeklgreptdeevake
lgisteelfktldkinfsyilsleevfrdfardyselipsstnveeevikreltekvkea
vsklpereklviqlifyeelpakevakiletsvsrvsqlkakalerlremlsnpl

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1rp3F (F:)
mvnrielsrligllletekrknteqkesgtnkiedkvtlskiaqelskndveekdlekkv
kelkekiekgeyevsdekvvkgliefft

    Sequence, based on observed residues (ATOM records): (download) 
    >1rp3F (F:)
rielsrligllletdkvtlskiaqelsknddlekkvkelkekiekgeyevsdekvvkgli
efft

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >1rp3G (G:)
gshmknpysnqiereelilkylplvkaiatnikkhlpedvdirdlisygviglikavdnl
stenpkraeayiklrikgaiydylrsldfgsrqvrekerrikevveklkeklgreptdee
vakelgisteelfktldkinfsyilsleevfrdfardyselipsstnveeevikreltek
vkeavsklpereklviqlifyeelpakevakiletsvsrvsqlkakalerlremlsnpl

    Sequence, based on observed residues (ATOM records): (download) 
    >1rp3G (G:)
mknpysnqiereelilkylplvkaiatnikkhlpedvdirdlisygviglikavdnlste
npkraeayiklrikgaiydylrsldfgsrqvrekerrikevveklkeklgreptdeevak
elgisteelfktldkinfsyilsleevfrdfardyseevikreltekvkeavsklperek
lviqlifyeelpakevakiletsvsrvsqlkakalerlremlsnpl

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >1rp3H (H:)
mvnrielsrligllletekrknteqkesgtnkiedkvtlskiaqelskndveekdlekkv
kelkekiekgeyevsdekvvkgliefft

    Sequence, based on observed residues (ATOM records): (download) 
    >1rp3H (H:)
mvnrielsrligllletekrkdkvtlskiaqelskndlekkvkelkekiekgeyevsdek
vvkgliefft