PDB entry 1o3t

View 1o3t on RCSB PDB site
Description: protein-DNA recognition and DNA deformation revealed in crystal structures of cap-DNA complexes
Class: gene regulation/DNA
Keywords: protein-DNA complex, cap, cap-DNA, catabolite gene activator protein, camp receptor protein, crp, gene regulation/DNA complex
Deposited on 2003-03-18, released 2003-04-08
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.23
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: catabolite gene activator protein
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1o3ta1, d1o3ta2
  • Chain 'B':
    Compound: catabolite gene activator protein
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1o3tb1, d1o3tb2
  • Chain 'C':
    Compound: 5'-d(*gp*cp*gp*ap*ap*ap*ap*ap*tp*gp*cp*gp*ap*t)-3'
  • Chain 'D':
    Compound: 5'-d(*cp*tp*ap*gp*ap*tp*cp*gp*cp*ap*tp*tp*tp*tp*tp*cp*g)-3'
  • Chain 'E':
    Compound: 5'-d(*cp*tp*ap*gp*ap*tp*cp*gp*cp*ap*tp*tp*tp*tp*tp*cp*g)-3'
  • Chain 'F':
    Compound: 5'-d(*gp*cp*gp*ap*ap*ap*ap*ap*tp*gp*cp*gp*ap*t)-3'
  • Heterogens: CMP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1o3tA (A:)
dptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqg
dfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvt
sekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcsretvgril
kmledqnlisahgktivvyg

    Sequence, based on observed residues (ATOM records): (download) 
    >1o3tA (A:)
ptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgd
figelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvts
ekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcsretvgrilk
mledqnlisahgktivvyg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1o3tB (B:)
dptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqg
dfigelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvt
sekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcsretvgril
kmledqnlisahgktivvyg

    Sequence, based on observed residues (ATOM records): (download) 
    >1o3tB (B:)
ptlewflshchihkypskstlihqgekaetlyyivkgsvavlikdeegkemilsylnqgd
figelglfeegqersawvraktacevaeisykkfrqliqvnpdilmrlsaqmarrlqvts
ekvgnlafldvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcsretvgrilk
mledqnlisahgktivv

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.