PDB entry 1k79

View 1k79 on RCSB PDB site
Description: Ets-1(331-440)+GGAA duplex
Class: transcription/DNA
Keywords: ETS domain, transcription factor, TRANSCRIPTION/DNA COMPLEX
Deposited on 2001-10-18, released 2002-01-04
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.224
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: c-ets-1 protein
    Species: Mus musculus [TaxId:10090]
    Gene: ETS-1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1k79a_
  • Chain 'B':
    Compound: DNA (5'-d(*tp*ap*gp*tp*gp*cp*cp*gp*gp*ap*ap*ap*tp*gp*t)-3')
  • Chain 'C':
    Compound: DNA (5'-d(*cp*ap*cp*ap*tp*tp*tp*cp*cp*gp*gp*cp*ap*cp*t)-3')
  • Chain 'D':
    Compound: c-ets-1 protein
    Species: Mus musculus [TaxId:10090]
    Gene: ETS-1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1k79d_
  • Chain 'E':
    Compound: DNA (5'-d(*tp*ap*gp*tp*gp*cp*cp*gp*gp*ap*ap*ap*tp*gp*t)-3')
  • Chain 'F':
    Compound: DNA (5'-d(*cp*ap*cp*ap*tp*tp*tp*cp*cp*gp*gp*cp*ap*cp*t)-3')
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1k79A (A:)
gsgpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyekls
rglryyydkniihktagkryvyrfvcdlqsllgytpeelhamldvkpdad

    Sequence, based on observed residues (ATOM records): (download) 
    >1k79A (A:)
gpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeklsrg
lryyydkniihktagkryvyrfvcdlqsllgytpeelhamldvk

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1k79D (D:)
gsgpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyekls
rglryyydkniihktagkryvyrfvcdlqsllgytpeelhamldvkpdad

    Sequence, based on observed residues (ATOM records): (download) 
    >1k79D (D:)
gpiqlwqfllelltdkscqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyeklsrg
lryyydkniihktagkryvyrfvcdlqsllgytpeelhamldvk

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.