PDB entry 1jyo

View 1jyo on RCSB PDB site
Description: Structure of the Salmonella Virulence Effector SptP in Complex with its Secretion Chaperone SicP
Class: chaperone
Keywords: Salmonella, bacterial pathogenesis, infectious disease, virulence factor, type III secretion, chaperone, unfolded, protein folding, SptP, SicP
Deposited on 2001-09-12, released 2001-11-07
The last revision prior to the SCOP 1.73 freeze date was dated 2005-03-29, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.224
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: SicP
    Species: Salmonella typhimurium
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1jyoa_
  • Chain 'B':
    Compound: SicP
    Species: Salmonella typhimurium
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1jyob_
  • Chain 'C':
    Compound: SicP
    Species: Salmonella typhimurium
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1jyoc_
  • Chain 'D':
    Compound: SicP
    Species: Salmonella typhimurium
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1jyod_
  • Chain 'E':
    Compound: protein tyrosine phosphatase sptp
    Species: Salmonella typhimurium
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1jyoe_
  • Chain 'F':
    Compound: protein tyrosine phosphatase sptp
    Species: Salmonella typhimurium
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1jyof_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1jyoA (A:)
lqahqdiianigeklglpltfddnnqclllldsdiftsieakddiwllngmiiplspvcg
dsiwrqimvingelaannegtlayidaaetlllihaitdltntyhiisqlesfvnqqeal
knilqeyakv

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1jyoB (B:)
lqahqdiianigeklglpltfddnnqclllldsdiftsieakddiwllngmiiplspvcg
dsiwrqimvingelaannegtlayidaaetlllihaitdltntyhiisqlesfvnqqeal
knilqeyakv

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1jyoC (C:)
lqahqdiianigeklglpltfddnnqclllldsdiftsieakddiwllngmiiplspvcg
dsiwrqimvingelaannegtlayidaaetlllihaitdltntyhiisqlesfvnqqeal
knilqeyakv

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1jyoD (D:)
lqahqdiianigeklglpltfddnnqclllldsdiftsieakddiwllngmiiplspvcg
dsiwrqimvingelaannegtlayidaaetlllihaitdltntyhiisqlesfvnqqeal
knilqeyakv

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1jyoE (E:)
tdkayvapekfsskvltwlgkmplfkntevvqkhtenirvqdqkilqtflhaltekyget
avndallmsrinmnkpltqrlavqitecvkaadegfinlikskdn

    Sequence, based on observed residues (ATOM records): (download) 
    >1jyoE (E:)
dkayvapekfsskvltwlgkmplfkntevvqkhtenirvqdqkilqtflhaltekygeta
vndallmsrinmnkpltqrlavqitecvkaadegfinliksk

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1jyoF (F:)
tdkayvapekfsskvltwlgkmplfkntevvqkhtenirvqdqkilqtflhaltekyget
avndallmsrinmnkpltqrlavqitecvkaadegfinlikskdn

    Sequence, based on observed residues (ATOM records): (download) 
    >1jyoF (F:)
dkayvapekfsskvltwlgkmplfkntevvqkhtenirvqdqkilqtflhaltekygeta
vndallmsrinmnkpltqrlavqitecvkaadegfinlikskdn