PDB entry 1h6k

View 1h6k on RCSB PDB site
Description: nuclear cap binding complex
Class: nuclear protein
Keywords: m7g cap, cap-binding-complex, rnp domain, mif4g domain, RNA maturation, RNA export, crystal structure, nuclear protein
Deposited on 2001-06-18, released 2001-09-13
The last revision prior to the SCOP 1.75 freeze date was dated 2003-04-01, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.203
AEROSPACI score: 0.53 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: cbp80
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q09161
      • engineered mutation (459)
    Domains in SCOP 1.75: d1h6ka1, d1h6ka2, d1h6ka3
  • Chain 'B':
    Compound: cbp80
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q09161
      • engineered mutation (459)
    Domains in SCOP 1.75: d1h6kb1, d1h6kb2, d1h6kb3
  • Chain 'C':
    Compound: cbp80
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q09161
      • engineered mutation (459)
    Domains in SCOP 1.75: d1h6kc1, d1h6kc2, d1h6kc3
  • Chain 'X':
    Compound: 20 kda nuclear cap binding protein
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1h6kx_
  • Chain 'Y':
    Compound: 20 kda nuclear cap binding protein
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1h6ky_
  • Chain 'Z':
    Compound: 20 kda nuclear cap binding protein
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1h6kz_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1h6kA (A:)
ktsdanetedhleslickvgeksacslesnleglagvleadlpnykskilrllctvarll
pekltiyttlvgllnarnynfggefveamirqlkeslkannyneavylvrflsdlvnchv
iaapsmvamfenfvsvtqeedvpqvrrdwyvyaflsslpwvgkelyekkdaemdrifant
esylkrrqkthvpmlqvwtadkphpqeeyldclwaqiqklkkdrwqerhilrpylafdsi
lcealqhnlppftppphtedsvypmprvifrmfdytddpegpvmpgshsverfvieenlh
ciikshwkerktcaaqlvsypgknkiplnyhivevifaelfqlpapphidvmyttlliel
cklqpgslpqvlaqatemlymrldtmnttcvdrfinwfshhlsnfqfrwswedwsdclsq
dpespkpkfvrevlekcmrlsyhqrildivpptfsalcpsnptciykygdessnslpghs
valclavafkskatndeifsilkdvpnpnqdddddegfsfnplkievfvqtllhlaaksf
shsfsalakfhevfktlaesdegklhvlrvmfevwrnhpqmiavlvdkmirtqivdcaav
anwifsselsrdftrlfvweilhstirkmnkhvlkiqkeleeakeklarqhdgvleeqie
rlqekvesaqseqknlflvifqrfimiltehlvrcetdgtsvltpwykncierlqqiflq
hhqiiqqymvtlenllftaeldphilavfqqfcalqa

    Sequence, based on observed residues (ATOM records): (download) 
    >1h6kA (A:)
tedhleslickvgeksacslesnleglagvleadlpnykskilrllctvarllpekltiy
ttlvgllnarnynfggefveamirqlkeslkannyneavylvrflsdlvnchviaapsmv
amfenfvsvtqeedvpqvrrdwyvyaflsslpwvgkelyekkdaemdrifantesylkrr
qkthvpmlqvwtadkphpqeeyldclwaqiqklkkdrwqerhilrpylafdsilcealqh
nlppftppphtedsvypmprvifrmfdytddpegpvmpgshsverfvieenlhciikshw
kerktcaaqlvsypgknkiplnyhivevifaelfqlpapphidvmyttllielcklqpgs
lpqvlaqatemlymrldtmnttcvdrfinwfshhlsnfqfrwswedwsdclsqdpespkp
kfvrevlekcmrlsyhqrildivpptfsalcpsnptciykygdessnslpghsvalclav
afkskatndeifsilkdvpnfnplkievfvqtllhlaaksfshsfsalakfhevfktlae
sdegklhvlrvmfevwrnhpqmiavlvdkmirtqivdcaavanwifsselsrdftrlfvw
eilhstirkmnkhvlkiqkeleeakekeqierlqekvesaqseqknlflvifqrfimilt
ehlvrcetdgtsvltpwykncierlqqiflqhhqiiqqymvtlenllftaeldphilavf
qqfcalqa

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1h6kB (B:)
ktsdanetedhleslickvgeksacslesnleglagvleadlpnykskilrllctvarll
pekltiyttlvgllnarnynfggefveamirqlkeslkannyneavylvrflsdlvnchv
iaapsmvamfenfvsvtqeedvpqvrrdwyvyaflsslpwvgkelyekkdaemdrifant
esylkrrqkthvpmlqvwtadkphpqeeyldclwaqiqklkkdrwqerhilrpylafdsi
lcealqhnlppftppphtedsvypmprvifrmfdytddpegpvmpgshsverfvieenlh
ciikshwkerktcaaqlvsypgknkiplnyhivevifaelfqlpapphidvmyttlliel
cklqpgslpqvlaqatemlymrldtmnttcvdrfinwfshhlsnfqfrwswedwsdclsq
dpespkpkfvrevlekcmrlsyhqrildivpptfsalcpsnptciykygdessnslpghs
valclavafkskatndeifsilkdvpnpnqdddddegfsfnplkievfvqtllhlaaksf
shsfsalakfhevfktlaesdegklhvlrvmfevwrnhpqmiavlvdkmirtqivdcaav
anwifsselsrdftrlfvweilhstirkmnkhvlkiqkeleeakeklarqhdgvleeqie
rlqekvesaqseqknlflvifqrfimiltehlvrcetdgtsvltpwykncierlqqiflq
hhqiiqqymvtlenllftaeldphilavfqqfcalqa

    Sequence, based on observed residues (ATOM records): (download) 
    >1h6kB (B:)
etedhleslickvgeksacslesnleglagvleadlpnykskilrllctvarllpeklti
yttlvgllnarnynfggefveamirqlkeslkannyneavylvrflsdlvnchviaapsm
vamfenfvsvtqeedvpqvrrdwyvyaflsslpwvgkelyekkdaemdrifantesylkr
rqkthvpmlqvwtadkphpqeeyldclwaqiqklkkdrwqerhilrpylafdsilcealq
hnlppftppphtedsvypmprvifrmfdytddpegpvmpgshsverfvieenlhciiksh
wkerktcaaqlvsypgknkiplnyhivevifaelfqlpapphidvmyttllielcklqpg
slpqvlaqatemlymrldtmnttcvdrfinwfshhlsnfqfrwswedwsdclsqdpespk
pkfvrevlekcmrlsyhqrildivpptfsalcpsnptciykygdessnslpghsvalcla
vafkskatndeifsilkdvpnfnplkievfvqtllhlaaksfshsfsalakfhevfktla
esdegklhvlrvmfevwrnhpqmiavlvdkmirtqivdcaavanwifsselsrdftrlfv
weilhstirkmnkhvlkiqkeleeakeeeqierlqekvesaqseqknlflvifqrfimil
tehlvrcetdgtsvltpwykncierlqqiflqhhqiiqqymvtlenllftaeldphilav
fqqfcalqa

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1h6kC (C:)
ktsdanetedhleslickvgeksacslesnleglagvleadlpnykskilrllctvarll
pekltiyttlvgllnarnynfggefveamirqlkeslkannyneavylvrflsdlvnchv
iaapsmvamfenfvsvtqeedvpqvrrdwyvyaflsslpwvgkelyekkdaemdrifant
esylkrrqkthvpmlqvwtadkphpqeeyldclwaqiqklkkdrwqerhilrpylafdsi
lcealqhnlppftppphtedsvypmprvifrmfdytddpegpvmpgshsverfvieenlh
ciikshwkerktcaaqlvsypgknkiplnyhivevifaelfqlpapphidvmyttlliel
cklqpgslpqvlaqatemlymrldtmnttcvdrfinwfshhlsnfqfrwswedwsdclsq
dpespkpkfvrevlekcmrlsyhqrildivpptfsalcpsnptciykygdessnslpghs
valclavafkskatndeifsilkdvpnpnqdddddegfsfnplkievfvqtllhlaaksf
shsfsalakfhevfktlaesdegklhvlrvmfevwrnhpqmiavlvdkmirtqivdcaav
anwifsselsrdftrlfvweilhstirkmnkhvlkiqkeleeakeklarqhdgvleeqie
rlqekvesaqseqknlflvifqrfimiltehlvrcetdgtsvltpwykncierlqqiflq
hhqiiqqymvtlenllftaeldphilavfqqfcalqa

    Sequence, based on observed residues (ATOM records): (download) 
    >1h6kC (C:)
etedhleslickvgeksacslesnleglagvleadlpnykskilrllctvarllpeklti
yttlvgllnarnynfggefveamirqlkeslkannyneavylvrflsdlvnchviaapsm
vamfenfvsvtqeedvpqvrrdwyvyaflsslpwvgkelyekkdaemdrifantesylkr
rqkthvpmlqvwtadkphpqeeyldclwaqiqklkkdrwqerhilrpylafdsilcealq
hnlppftppphtedsvypmprvifrmfdytddpegpvmpgshsverfvieenlhciiksh
wkerktcaaqlvsypgknkiplnyhivevifaelfqlpapphidvmyttllielcklqpg
slpqvlaqatemlymrldtmnttcvdrfinwfshhlsnfqfrwswedwsdclsqdpespk
pkfvrevlekcmrlsyhqrildivpptfsalcpsnptciykygdessnslpghsvalcla
vafkskatndeifsilkdvpnpsfnplkievfvqtllhlaaksfshsfsalakfhevfkt
laesdegklhvlrvmfevwrnhpqmiavlvdkmirtqivdcaavanwifsselsrdftrl
fvweilhstirkmnkhvlkiqkeleeakekleeqierlqekvesaqseqknlflvifqrf
imiltehlvrcetdgtsvltpwykncierlqqiflqhhqiiqqymvtlenllftaeldph
ilavfqqfcalqa

  • Chain 'X':
    Sequence, based on SEQRES records: (download) 
    >1h6kX (X:)
dqhfrgdneeqekllkksctlyvgnlsfytteeqiyelfsksgdikkiimgldkmtacgf
cfveyysradaenamryingtrlddriirtdwdagfk

    Sequence, based on observed residues (ATOM records): (download) 
    >1h6kX (X:)
ksctlyvgnlsfytteeqiyelfsksgdikkiimgldkmcgfcfveyysradaenamryi
ngtrlddriirtdwdag

  • Chain 'Y':
    Sequence, based on SEQRES records: (download) 
    >1h6kY (Y:)
dqhfrgdneeqekllkksctlyvgnlsfytteeqiyelfsksgdikkiimgldkmtacgf
cfveyysradaenamryingtrlddriirtdwdagfk

    Sequence, based on observed residues (ATOM records): (download) 
    >1h6kY (Y:)
ksctlyvgnlsfytteeqiyelfsksgdikkiimgldkmcgfcfveyysradaenamryi
ngtrlddriirtdwda

  • Chain 'Z':
    Sequence, based on SEQRES records: (download) 
    >1h6kZ (Z:)
dqhfrgdneeqekllkksctlyvgnlsfytteeqiyelfsksgdikkiimgldkmktacg
fcfveyysradaenamryingtrlddriirtdwdagfk

    Sequence, based on observed residues (ATOM records): (download) 
    >1h6kZ (Z:)
ksctlyvgnlsfytteeqiyelfsksgdikkiimgldkmkcgfcfveyysradaenamry
ingtrlddriirtdwdag