PDB entry 1e8d
View 1e8d on RCSB PDB site
Description: mechanistic aspects of cyanogenesis from active site mutant ser80ala of hydroxynitrile lyase from manihot esculenta in complex with acetone cyanohydrin
Class: lyase
Keywords: lyase, hydroxynitrile lyase, active site mutant, acetone cyanohydrin complex
Deposited on
2000-09-19, released
2001-08-17
The last revision prior to the SCOPe 2.01 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.186
AEROSPACI score: 0.41
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: hydroxynitrile lyase
Species: MANIHOT ESCULENTA [TaxId:3983]
Database cross-references and differences (RAF-indexed):
- PDB 1E8D (0-4)
- cloning artifact (0-4)
- engineered mutation (83)
- Uniprot P52705 (5-261)
Domains in SCOPe 2.01: d1e8da_ - Chain 'B':
Compound: hydroxynitrile lyase
Species: MANIHOT ESCULENTA [TaxId:3983]
Database cross-references and differences (RAF-indexed):
- PDB 1E8D (Start-4)
- cloning artifact (4)
- engineered mutation (83)
- Uniprot P52705 (5-261)
Domains in SCOPe 2.01: d1e8db_ - Heterogens: CNH, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1e8dA (A:)
piskmvtahfvlihtichgawiwhklkpaleraghkvtaldmaasgidprqieqinsfde
yseplltfleklpqgekviivgeacaglniaiaadryvdkiaagvfhnsllpdtvhspsy
tvekllesfpdwrdteyftftnitgetittmklgfvllrenlftkctdgeyelakmvmrk
gslfqnvlaqrpkftekgygsikkvyiwtdqdkiflpdfqrwqianykpdkvyqvqggdh
klqltkteevahilqevadaya
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1e8dB (B:)
piskmvtahfvlihtichgawiwhklkpaleraghkvtaldmaasgidprqieqinsfde
yseplltfleklpqgekviivgeacaglniaiaadryvdkiaagvfhnsllpdtvhspsy
tvekllesfpdwrdteyftftnitgetittmklgfvllrenlftkctdgeyelakmvmrk
gslfqnvlaqrpkftekgygsikkvyiwtdqdkiflpdfqrwqianykpdkvyqvqggdh
klqltkteevahilqevadaya
Sequence, based on observed residues (ATOM records): (download)
>1e8dB (B:)
mvtahfvlihtichgawiwhklkpaleraghkvtaldmaasgidprqieqinsfdeysep
lltfleklpqgekviivgeacaglniaiaadryvdkiaagvfhnsllpdtvhspsytvek
llesfpdwrdteyftftnitgetittmklgfvllrenlftkctdgeyelakmvmrkgslf
qnvlaqrpkftekgygsikkvyiwtdqdkiflpdfqrwqianykpdkvyqvqggdhklql
tkteevahilqevadaya