PDB entry 1bpd
View 1bpd on RCSB PDB site
Description: crystal structure of rat DNA polymerase beta: evidence for a common polymerase mechanism
Class: nucleotidyltransferase
Keywords: nucleotidyltransferase
Deposited on
1994-04-12, released
1994-06-22
The last revision prior to the SCOPe 2.02 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 3.6 Å
R-factor: 0.193
AEROSPACI score: 0.14
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: DNA polymerase beta
Species: Rattus norvegicus [TaxId:10116]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.02: d1bpda1, d1bpda2, d1bpda3 - Heterogens: PO4
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1bpdA (A:)
mskrkapqetlnggitdmlvelanfeknvsqaihkynayrkaasviakyphkiksgaeak
klpgvgtkiaekideflatgklrklekirqddtsssinfltrvtgigpsaarklvdegik
tledlrknedklnhhqriglkyfedfekripreemlqmqdivlnevkkldpeyiatvcgs
frrgaessgdmdvllthpnftsesskqpkllhrvveqlqkvrfitdtlskgetkfmgvcq
lpsendeneyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirp
lgvtgvageplpvdseqdifdyiqwryrepkdrse
Sequence, based on observed residues (ATOM records): (download)
>1bpdA (A:)
etlnggitdmlvelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtk
iaekideflatgklrklekirqddtsssinfltrvtgigpsaarklvdegiktledlrkn
edklnhhqriglkyfedfekripreemlqmqdivlnevkkldpeyiatvcgsfrrgaess
gdmdvllthpnftsesskqpkllhrvveqlqkvrfitdtlskgetkfmgvcqlpseneyp
hrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvagepl
pvdseqdifdyiqwryrepkdrse