Lineage for d1sgva2 (1sgv A:3-235)

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1687861Fold d.265: Pseudouridine synthase [100877] (1 superfamily)
    consists of two alpha+beta subdomains with some similarity to the ferredoxin-like fold
  4. 1687862Superfamily d.265.1: Pseudouridine synthase [55120] (5 families) (S)
    the active site is the most conserved structural region of the superfamily and is located between the subdomains
  5. 1687877Family d.265.1.2: Pseudouridine synthase II TruB [69746] (2 proteins)
    contains C-terminal PUA domain
  6. 1687878Protein Pseudouridine synthase II TruB [69747] (5 species)
  7. 1687885Species Mycobacterium tuberculosis [TaxId:1773] [103017] (1 PDB entry)
  8. 1687886Domain d1sgva2: 1sgv A:3-235 [98859]
    Other proteins in same PDB: d1sgva1, d1sgvb1

Details for d1sgva2

PDB Entry: 1sgv (more details), 1.9 Å

PDB Description: structure of trna psi55 pseudouridine synthase (trub)
PDB Compounds: (A:) tRNA pseudouridine synthase B

SCOPe Domain Sequences for d1sgva2:

Sequence, based on SEQRES records: (download)

>d1sgva2 d.265.1.2 (A:3-235) Pseudouridine synthase II TruB {Mycobacterium tuberculosis [TaxId: 1773]}
atgpgivvidkpagmtshdvvgrcrrifatrrvghagtldpmatgvlvigieratkilgl
ltaapksyaatirlgqttstedaegqvlqsvpakhltieaidaamerlrgeirqvpssvs
aikvggrrayrlarqgrsvqlearpiridrfellaarrrdqlididveidcssgtyiral
ardlgdalgvgghvtalrrtrvgrfeldqarslddlaerpalslsldeacllm

Sequence, based on observed residues (ATOM records): (download)

>d1sgva2 d.265.1.2 (A:3-235) Pseudouridine synthase II TruB {Mycobacterium tuberculosis [TaxId: 1773]}
atgpgivvidkpagmtshdvvgrcrrifatrrvghagtldpmatgvlvigieratkilgl
ltaapksyaatirlgqttstedaegqvlqsvpakhltieaidaamerlrgeilearpiri
drfellaarrrdqlididveidcssgtyiralardlgdalgvgghvtalrrtrvgrfeld
qarslddlaerpalslsldeacllm

SCOPe Domain Coordinates for d1sgva2:

Click to download the PDB-style file with coordinates for d1sgva2.
(The format of our PDB-style files is described here.)

Timeline for d1sgva2:

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Domains from same chain:
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d1sgva1