Class b: All beta proteins [48724] (178 folds) |
Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies) sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies |
Superfamily b.121.5: ssDNA viruses [88645] (4 families) |
Family b.121.5.2: Parvoviridae-like VP [88646] (3 proteins) automatically mapped to Pfam PF00740 |
Protein Parvovirus (panleukopenia virus) capsid protein [49661] (6 species) |
Species Canine parvovirus [TaxId:10788] [49662] (7 PDB entries) |
Domain d1p5wa_: 1p5w A: [94150] protein/DNA complex; complexed with mg; mutant |
PDB Entry: 1p5w (more details), 3.3 Å
SCOPe Domain Sequences for d1p5wa_:
Sequence, based on SEQRES records: (download)
>d1p5wa_ b.121.5.2 (A:) Parvovirus (panleukopenia virus) capsid protein {Canine parvovirus [TaxId: 10788]} gvgistgtfnnqtefkflengwveitanssrlvhlnmpesenyrrvvvnnmdktavrgnm alddihaqivtpwslvdanawgvwfnpgdwqlivntmselhlvsfeqeifnvvlktvses atqpptkvynndltaslmvaldsnntmpftpaamrsetlgfypwkptiptpwryyfqwdr tlipshtgtsgtptniyhgtdpddvqfytiensvpvhllrtgdefatgtfffdckpcrlt htwqtnralglppflnslpqsegatnfgdigvqqdkrrgvtqmgntnyiteatimrpaev gysapyysfeastqgpfktpiaagrggaqtdenqaadgnpryafgrqhgqkttttgetpe rftyiahqdtgrypegdwiqninfnlpvtndnvllptdpiggktginytnifntygplta lnnvppvypngqiwdkefdtdlkprlhvnapfvcqnncpgqlfvkvapnltneydpdasa nmsrivtysdfwwkgklvfkaklrashtwnpiqqmsinvdnqfnyvpsniggmkivyeks qlaprkly
>d1p5wa_ b.121.5.2 (A:) Parvovirus (panleukopenia virus) capsid protein {Canine parvovirus [TaxId: 10788]} gvgistgtfnnqtefkflengwveitanssrlvhlnmpesenyrrvvvnnmdktavrgnm alddihaqivtpwslvdanawgvwfnpgdwqlivntmselhlvsfeqeifnvvlktvsep ptkvynndltaslmvaldsnntmpftpaamrsetlgfypwkptiptpwryyfqwdrtlip shtgtsgtptniyhgtdpddvqfytiensvpvhllrtgdefatgtfffdckpcrlthtwq tnralglppflnslpqsegatnfgdigvqqdkrrgvtqmgntnyiteatimrpaevgysa pyysfeastqgpfktpiaagrggaqtdenqaadgnpryafgrqhgqkttttgetperfty iahqdtgrypegdwiqninfnlpvtndnvllptdpiggktginytnifntygpltalnnv ppvypngqiwdkefdtdlkprlhvnapfvcqnncpgqlfvkvapnltneydpdasanmsr ivtysdfwwkgklvfkaklrashtwnpiqqmsinvdnqfnyvpsniggmkivyeksqlap rkly
Timeline for d1p5wa_: