SCOPe 2.06: Domain d1owma2: 1owm A:2-204

Lineage for d1owma2 (1owm A:2-204)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.28: Cryptochrome/photolyase, N-terminal domain [52424] (1 superfamily)
   3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32145; Rossmann-like

4. Superfamily c.28.1: Cryptochrome/photolyase, N-terminal domain [52425] (2 families)
   automatically mapped to Pfam PF00875

5. Family c.28.1.1: Cryptochrome/photolyase, N-terminal domain [52426] (3 proteins)

6. Protein DNA photolyase [52427] (3 species)
   binds a light-harvesting cofactor

7. Species Synechococcus elongatus [TaxId:32046] [52429] (7 PDB entries)
   Uniprot P05327 1-474
   cofactor is HDF

8. Domain d1owma2: 1owm A:2-204 [93650]
   Other proteins in same PDB: d1owma1
   complexed with fad, po4

Details for d1owma2

PDB Entry: 1owm, 2.3 Å

PDB Description: DATA1:DNA photolyase / received X-rays dose 1.2 exp15 photons/mm2

PDB Compounds: (A:) Deoxyribodipyrimidine photolyase

SCOPe Domain Sequences for d1owma2:

Sequence; same for both SEQRES and ATOM records:

>d1owma2 c.28.1.1 (A:2-204) DNA photolyase {Synechococcus elongatus [TaxId: 32046]}
aapilfwhrrdlrlsdniglaaaraqsaqliglfcldpqilqsadmaparvaylqgclqe
lqqryqqagsrllllqgdpqhlipqlaqqlqaeavywnqdiepygrdrdgqvaaalktag
iravqlwdqllhspdqilsgsgnpysvygpfwknwqaqpkptpvatptelvdlspeqlta
iaplllselptlkqlgfdwdggf

Timeline for d1owma2:

• d1owma2 first appeared in SCOP 1.67
  
• d1owma2 appears in SCOPe 2.05
  
• d1owma2 appears in SCOPe 2.07
  
• d1owma2 appears in the current release, SCOPe 2.08