Lineage for Family d.38.1.5: PaaI/YdiI-like

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2511612Fold d.38: Thioesterase/thiol ester dehydrase-isomerase [54636] (1 superfamily)
    core: beta-alpha-beta(4); 2 layers: alpha/beta
  4. 2511613Superfamily d.38.1: Thioesterase/thiol ester dehydrase-isomerase [54637] (9 families) (S)
  5. 2511928Family d.38.1.5: PaaI/YdiI-like [89902] (15 protein domains)

Protein Domains:

  1. 25119294-hydroxybenzoyl CoA thioesterase [102914] (1 species)
  2. 2511937Hypothetical protein CC3309 [143177] (1 species)
  3. 2511940Hypothetical protein HI1161 [89905] (1 species)
  4. 2511950Hypothetical protein PA1835 [143182] (1 species)
  5. 2511954Hypothetical protein PA5026 [110900] (1 species)
  6. 2511958Hypothetical protein PA5202 [143175] (1 species)
  7. 2511962Hypothetical protein PH1136 [102916] (1 species)
  8. 2511965Hypothetical protein RHA1_ro05818 [160184] (1 species)
    includes two extra N-terminal helices forming an interlocking four-helical bundle in the dimer
  9. 2511971Hypothetical protein Them2 [143179] (2 species)
    1. 2511972Species Human (Homo sapiens) [TaxId:9606] [143181] (2 PDB entries)
      Uniprot Q9NPJ3 19-139! Uniprot Q9NPJ3 3-138
    2. 2511978Species Mouse (Mus musculus) [TaxId:10090] [143180] (1 PDB entry)
      Uniprot Q9CQR4 13-139
  10. 2511980Hypothetical protein YbdB [102912] (1 species)
  11. 2511984Hypothetical protein YdiI [102910] (1 species)
  12. 2512016Phenylacetic acid degradation protein PaaI [89903] (2 species)
    1. 2512017Species Escherichia coli [TaxId:562] [89904] (2 PDB entries)
    2. 2512022Species Thermus thermophilus [TaxId:274] [102909] (1 PDB entry)
  13. 2512025Putative thioesterase SO4397 [110898] (1 species)
  14. 2512031Transcription factor FapR, C-terminal domain [143184] (1 species)
  15. 2512039automated matches [190102] (7 species)
    not a true protein
    1. 2512040Species Arthrobacter sp. [TaxId:1667] [194804] (11 PDB entries)
    2. 2512063Species Escherichia coli [TaxId:83333] [257785] (2 PDB entries)
    3. 2512070Species Haemophilus influenzae [TaxId:727] [186964] (1 PDB entry)
    4. 2512079Species Human (Homo sapiens) [TaxId:9606] [187682] (2 PDB entries)
    5. 2512095Species Mouse (Mus musculus) [TaxId:10090] [187583] (1 PDB entry)
    6. 2512097Species Thermus thermophilus HB8 [TaxId:300852] [186824] (5 PDB entries)
    7. 2512125Species Zebrafish (Danio rerio) [TaxId:7955] [311409] (1 PDB entry)

More info for Family d.38.1.5: PaaI/YdiI-like

Timeline for Family d.38.1.5: PaaI/YdiI-like: