Lineage for Species: Escherichia coli [TaxId: 562]

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2511612Fold d.38: Thioesterase/thiol ester dehydrase-isomerase [54636] (1 superfamily)
    core: beta-alpha-beta(4); 2 layers: alpha/beta
  4. 2511613Superfamily d.38.1: Thioesterase/thiol ester dehydrase-isomerase [54637] (9 families) (S)
  5. 2511928Family d.38.1.5: PaaI/YdiI-like [89902] (15 protein domains)
  6. 2511984Protein Hypothetical protein YdiI [102910] (1 species)
  7. 2511985Species Escherichia coli [TaxId:562] [102911] (6 PDB entries)

PDB entries in Species: Escherichia coli [TaxId: 562]:

  1. Domain(s) for 1sbk:
    1. 2511992Domain d1sbka1: 1sbk A:1-136 [98791]
      Other proteins in same PDB: d1sbka2, d1sbkb2, d1sbkc2, d1sbkd2
      structural genomics; NESG target ER29
      complexed with so4
    2. 2511993Domain d1sbkb1: 1sbk B:1-136 [98792]
      Other proteins in same PDB: d1sbka2, d1sbkb2, d1sbkc2, d1sbkd2
      structural genomics; NESG target ER29
      complexed with so4
    3. 2511994Domain d1sbkc1: 1sbk C:1-136 [98793]
      Other proteins in same PDB: d1sbka2, d1sbkb2, d1sbkc2, d1sbkd2
      structural genomics; NESG target ER29
      complexed with so4
    4. 2511995Domain d1sbkd1: 1sbk D:1-136 [98794]
      Other proteins in same PDB: d1sbka2, d1sbkb2, d1sbkc2, d1sbkd2
      structural genomics; NESG target ER29
      complexed with so4
  2. Domain(s) for 1vh5:
    1. 2511986Domain d1vh5a1: 1vh5 A:2-136 [100642]
      Other proteins in same PDB: d1vh5a2, d1vh5a3, d1vh5b2, d1vh5b3
      structural genomics
    2. 2511987Domain d1vh5b1: 1vh5 B:2-136 [100643]
      Other proteins in same PDB: d1vh5a2, d1vh5a3, d1vh5b2, d1vh5b3
      structural genomics
  3. Domain(s) for 1vi8:
    1. 2512008Domain d1vi8a1: 1vi8 A:2-136 [100742]
      Other proteins in same PDB: d1vi8a2, d1vi8a3, d1vi8b2, d1vi8b3, d1vi8c2, d1vi8c3, d1vi8d2, d1vi8d3, d1vi8e2, d1vi8e3, d1vi8f2, d1vi8f3, d1vi8g2, d1vi8g3, d1vi8h2, d1vi8h3
      structural genomics
    2. 2512009Domain d1vi8b1: 1vi8 B:2-136 [100743]
      Other proteins in same PDB: d1vi8a2, d1vi8a3, d1vi8b2, d1vi8b3, d1vi8c2, d1vi8c3, d1vi8d2, d1vi8d3, d1vi8e2, d1vi8e3, d1vi8f2, d1vi8f3, d1vi8g2, d1vi8g3, d1vi8h2, d1vi8h3
      structural genomics
    3. 2512010Domain d1vi8c1: 1vi8 C:2-136 [100744]
      Other proteins in same PDB: d1vi8a2, d1vi8a3, d1vi8b2, d1vi8b3, d1vi8c2, d1vi8c3, d1vi8d2, d1vi8d3, d1vi8e2, d1vi8e3, d1vi8f2, d1vi8f3, d1vi8g2, d1vi8g3, d1vi8h2, d1vi8h3
      structural genomics
    4. 2512011Domain d1vi8d1: 1vi8 D:2-136 [100745]
      Other proteins in same PDB: d1vi8a2, d1vi8a3, d1vi8b2, d1vi8b3, d1vi8c2, d1vi8c3, d1vi8d2, d1vi8d3, d1vi8e2, d1vi8e3, d1vi8f2, d1vi8f3, d1vi8g2, d1vi8g3, d1vi8h2, d1vi8h3
      structural genomics
    5. 2512012Domain d1vi8e1: 1vi8 E:2-136 [100746]
      Other proteins in same PDB: d1vi8a2, d1vi8a3, d1vi8b2, d1vi8b3, d1vi8c2, d1vi8c3, d1vi8d2, d1vi8d3, d1vi8e2, d1vi8e3, d1vi8f2, d1vi8f3, d1vi8g2, d1vi8g3, d1vi8h2, d1vi8h3
      structural genomics
    6. 2512013Domain d1vi8f1: 1vi8 F:2-136 [100747]
      Other proteins in same PDB: d1vi8a2, d1vi8a3, d1vi8b2, d1vi8b3, d1vi8c2, d1vi8c3, d1vi8d2, d1vi8d3, d1vi8e2, d1vi8e3, d1vi8f2, d1vi8f3, d1vi8g2, d1vi8g3, d1vi8h2, d1vi8h3
      structural genomics
    7. 2512014Domain d1vi8g1: 1vi8 G:2-136 [100748]
      Other proteins in same PDB: d1vi8a2, d1vi8a3, d1vi8b2, d1vi8b3, d1vi8c2, d1vi8c3, d1vi8d2, d1vi8d3, d1vi8e2, d1vi8e3, d1vi8f2, d1vi8f3, d1vi8g2, d1vi8g3, d1vi8h2, d1vi8h3
      structural genomics
    8. 2512015Domain d1vi8h1: 1vi8 H:2-136 [100749]
      Other proteins in same PDB: d1vi8a2, d1vi8a3, d1vi8b2, d1vi8b3, d1vi8c2, d1vi8c3, d1vi8d2, d1vi8d3, d1vi8e2, d1vi8e3, d1vi8f2, d1vi8f3, d1vi8g2, d1vi8g3, d1vi8h2, d1vi8h3
      structural genomics
  4. Domain(s) for 4k49:
    1. 2511988Domain d4k49a_: 4k49 A: [266512]
      automated match to d1sbka_
      complexed with hfq
    2. 2511989Domain d4k49b_: 4k49 B: [266513]
      automated match to d1sbka_
      complexed with hfq
    3. 2511990Domain d4k49c_: 4k49 C: [266514]
      automated match to d1sbka_
      complexed with hfq
    4. 2511991Domain d4k49d_: 4k49 D: [266515]
      automated match to d1sbka_
      complexed with hfq
  5. Domain(s) for 4k4a:
    1. 2511996Domain d4k4aa_: 4k4a A: [266516]
      automated match to d1sbka_
      complexed with 0fq
    2. 2511997Domain d4k4ab_: 4k4a B: [266517]
      automated match to d1sbka_
      complexed with 0fq
    3. 2511998Domain d4k4ac_: 4k4a C: [266518]
      automated match to d1sbka_
      complexed with 0fq
    4. 2511999Domain d4k4ad_: 4k4a D: [266519]
      automated match to d1sbka_
      complexed with 0fq
  6. Domain(s) for 4k4b:
    1. 2512000Domain d4k4ba_: 4k4b A: [257792]
      automated match to d1sbka_
      complexed with cl, uoq
    2. 2512001Domain d4k4bb_: 4k4b B: [262787]
      automated match to d1sbka_
      complexed with cl, uoq
    3. 2512002Domain d4k4bc_: 4k4b C: [259069]
      automated match to d1sbka_
      complexed with cl, uoq
    4. 2512003Domain d4k4bd_: 4k4b D: [262788]
      automated match to d1sbka_
      complexed with cl, uoq
    5. 2512004Domain d4k4be_: 4k4b E: [262789]
      automated match to d1sbka_
      complexed with cl, uoq
    6. 2512005Domain d4k4bf_: 4k4b F: [262790]
      automated match to d1sbka_
      complexed with cl, uoq
    7. 2512006Domain d4k4bg_: 4k4b G: [262791]
      automated match to d1sbka_
      complexed with cl, uoq
    8. 2512007Domain d4k4bh_: 4k4b H: [262792]
      automated match to d1sbka_
      complexed with cl, uoq

More info for Species Escherichia coli [TaxId:562] from d.38.1.5 Hypothetical protein YdiI

Timeline for Species Escherichia coli [TaxId:562] from d.38.1.5 Hypothetical protein YdiI: