Lineage for Protein: Sm-Like archaeal protein Smap3

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2786770Fold b.38: Sm-like fold [50181] (5 superfamilies)
    core: barrel, open; n*=4, S*=8; meander; SH3-like topology
  4. 2786771Superfamily b.38.1: Sm-like ribonucleoproteins [50182] (7 families) (S)
  5. 2786772Family b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP [50183] (11 proteins)
    forms homo and heteroheptameric ring structures
    Pfam PF01423
  6. 2787032Protein Sm-Like archaeal protein Smap3 [89317] (1 species)
    contains additional C-terminal alpha+beta domain

Species:

  • 2787033Pyrobaculum aerophilum [TaxId:13773] [89318] (1 PDB entry)
    • Domains for 1m5q:
      1. 2787034Domain d1m5q1_: 1m5q 1: [84808]
        complexed with acy, cd, gol, na
        has additional subdomain(s) that are not in the common domain
      2. 2787035Domain d1m5q2_: 1m5q 2: [84809]
        complexed with acy, cd, gol, na
        has additional subdomain(s) that are not in the common domain
      3. 2787036Domain d1m5qa_: 1m5q A: [84810]
        complexed with acy, cd, gol, na
        has additional subdomain(s) that are not in the common domain
      4. 2787037Domain d1m5qb_: 1m5q B: [84811]
        complexed with acy, cd, gol, na
        has additional subdomain(s) that are not in the common domain
      5. 2787038Domain d1m5qc_: 1m5q C: [84812]
        complexed with acy, cd, gol, na
        has additional subdomain(s) that are not in the common domain
      6. 2787039Domain d1m5qd_: 1m5q D: [84813]
        complexed with acy, cd, gol, na
        has additional subdomain(s) that are not in the common domain
      7. 2787040Domain d1m5qe_: 1m5q E: [84814]
        complexed with acy, cd, gol, na
        has additional subdomain(s) that are not in the common domain
      8. 2787041Domain d1m5qf_: 1m5q F: [84815]
        complexed with acy, cd, gol, na
        has additional subdomain(s) that are not in the common domain
      9. 2787042Domain d1m5qg_: 1m5q G: [84816]
        complexed with acy, cd, gol, na
        has additional subdomain(s) that are not in the common domain
      10. 2787043Domain d1m5qh_: 1m5q H: [84817]
        complexed with acy, cd, gol, na
        has additional subdomain(s) that are not in the common domain
      11. 2787044Domain d1m5qi_: 1m5q I: [84818]
        complexed with acy, cd, gol, na
        has additional subdomain(s) that are not in the common domain
      12. 2787045Domain d1m5qj_: 1m5q J: [84819]
        complexed with acy, cd, gol, na
        has additional subdomain(s) that are not in the common domain
      13. 2787046Domain d1m5qk_: 1m5q K: [84820]
        complexed with acy, cd, gol, na
        has additional subdomain(s) that are not in the common domain
      14. 2787047Domain d1m5ql_: 1m5q L: [84821]
        complexed with acy, cd, gol, na
        has additional subdomain(s) that are not in the common domain
      15. 2787048Domain d1m5qm_: 1m5q M: [84822]
        complexed with acy, cd, gol, na
        has additional subdomain(s) that are not in the common domain
      16. 2787049Domain d1m5qn_: 1m5q N: [84823]
        complexed with acy, cd, gol, na
        has additional subdomain(s) that are not in the common domain
      17. 2787050Domain d1m5qo_: 1m5q O: [84824]
        complexed with acy, cd, gol, na
        has additional subdomain(s) that are not in the common domain
      18. 2787051Domain d1m5qp_: 1m5q P: [84825]
        complexed with acy, cd, gol, na
        has additional subdomain(s) that are not in the common domain
      19. 2787052Domain d1m5qq_: 1m5q Q: [84826]
        complexed with acy, cd, gol, na
        has additional subdomain(s) that are not in the common domain
      20. 2787053Domain d1m5qr_: 1m5q R: [84827]
        complexed with acy, cd, gol, na
        has additional subdomain(s) that are not in the common domain
      21. 2787054Domain d1m5qs_: 1m5q S: [84828]
        complexed with acy, cd, gol, na
        has additional subdomain(s) that are not in the common domain
      22. 2787055Domain d1m5qt_: 1m5q T: [84829]
        complexed with acy, cd, gol, na
        has additional subdomain(s) that are not in the common domain
      23. 2787056Domain d1m5qu_: 1m5q U: [84830]
        complexed with acy, cd, gol, na
        has additional subdomain(s) that are not in the common domain
      24. 2787057Domain d1m5qv_: 1m5q V: [84831]
        complexed with acy, cd, gol, na
        has additional subdomain(s) that are not in the common domain
      25. 2787058Domain d1m5qw_: 1m5q W: [84832]
        complexed with acy, cd, gol, na
        has additional subdomain(s) that are not in the common domain
      26. 2787059Domain d1m5qx_: 1m5q X: [84833]
        complexed with acy, cd, gol, na
        has additional subdomain(s) that are not in the common domain
      27. 2787060Domain d1m5qy_: 1m5q Y: [84834]
        complexed with acy, cd, gol, na
        has additional subdomain(s) that are not in the common domain
      28. 2787061Domain d1m5qz_: 1m5q Z: [84835]
        complexed with acy, cd, gol, na
        has additional subdomain(s) that are not in the common domain

More info for Protein Sm-Like archaeal protein Smap3 from b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP

Timeline for Protein Sm-Like archaeal protein Smap3 from b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP:

  • Protein Sm-Like archaeal protein Smap3 from b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP first appeared in SCOP 1.65
  • Protein Sm-Like archaeal protein Smap3 from b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP appears in SCOPe 2.07