Lineage for d1ubjs_ (1ubj S:)

  1. Root: SCOPe 2.08
  2. 3012399Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)
  3. 3019032Fold e.19: HydA/Nqo6-like [56769] (1 superfamily)
    2 domains: (1) alpa/beta; (2) Fe-S cluster-bound
  4. 3019033Superfamily e.19.1: HydA/Nqo6-like [56770] (3 families) (S)
  5. 3019034Family e.19.1.1: Nickel-iron hydrogenase, small subunit [56771] (2 proteins)
  6. 3019035Protein Nickel-iron hydrogenase, small subunit [56772] (5 species)
  7. 3019052Species Desulfovibrio vulgaris [TaxId:881] [56774] (16 PDB entries)
  8. 3019061Domain d1ubjs_: 1ubj S: [88421]
    Other proteins in same PDB: d1ubjl_
    complexed with cmo, f3s, fne, mg, sf4

Details for d1ubjs_

PDB Entry: 1ubj (more details), 1.35 Å

PDB Description: three-dimensional structure of the carbon monoxide complex of [nife]hydrogenase from desulufovibrio vulgaris miyazaki f
PDB Compounds: (S:) Periplasmic [NiFe] hydrogenase Small subunit

SCOPe Domain Sequences for d1ubjs_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ubjs_ e.19.1.1 (S:) Nickel-iron hydrogenase, small subunit {Desulfovibrio vulgaris [TaxId: 881]}
lmgprrpsvvylhnaectgcsesvlrafepyidtlildtlsldyhetimaaagdaaeaal
eqavnsphgfiavveggiptaangiygkvanhtmldicsrilpkaqaviaygtcatfggv
qaakpnptgakgvndalkhlgvkainiagcppnpynlvgtivyylknkaapeldslnrpt
mffgqtvheqcprlphfdagefapsfeseearkgwclyelgckgpvtmnncpkikfnqtn
wpvdaghpcigcsepdfwdamtpfyqn

SCOPe Domain Coordinates for d1ubjs_:

Click to download the PDB-style file with coordinates for d1ubjs_.
(The format of our PDB-style files is described here.)

Timeline for d1ubjs_: