SCOP 1.65: Species: Rat (Rattus norvegicus)

Lineage for Species: Rat (Rattus norvegicus)

Root: SCOP 1.65
Class d: Alpha and beta proteins (a+b) [53931] (234 folds)
Fold d.218: Nucleotidyltransferase [81302] (1 superfamily)
core: alpha-beta-turn-beta-X-beta-(alpha); mixed beta-sheet, order of core strands: 123
Superfamily d.218.1: Nucleotidyltransferase [81301] (4 families)
Family d.218.1.2: DNA polymerase beta-like [81300] (3 proteins)
insert X in the core is an alpha-beta(2) unit; mixed 5-stranded sheet, order: 12543; contains extra C-terminal alpha+beta subdomain
Protein DNA polymerase beta, catalytic (31 kD) fragment [81578] (2 species)
Species Rat (Rattus norvegicus) [TaxId:10116] [81576] (17 PDB entries)

PDB entries in Species: Rat (Rattus norvegicus):

Domain(s) for 1bpb:
- Domain d1bpb_2: 1bpb 149-335 [75812]
  Other proteins in same PDB: d1bpb_1
Domain(s) for 1bpd:
- Domain d1bpd_4: 1bpd 149-335 [75814]
  Other proteins in same PDB: d1bpd_1, d1bpd_3
  complexed with po4
Domain(s) for 1bpe:
- Domain d1bpe_4: 1bpe 149-335 [75816]
  Other proteins in same PDB: d1bpe_1, d1bpe_3
  complexed with dtp
Domain(s) for 1huo:
1. Domain d1huoa4: 1huo A:149-334 [75847]
  Other proteins in same PDB: d1huoa1, d1huoa3, d1huob1, d1huob3
2. Domain d1huob4: 1huo B:149-334 [75849]
  Other proteins in same PDB: d1huoa1, d1huoa3, d1huob1, d1huob3
  complexed with cr, tte
Domain(s) for 1huz:
1. Domain d1huza4: 1huz A:149-334 [75851]
  Other proteins in same PDB: d1huza1, d1huza3, d1huzb1, d1huzb3
2. Domain d1huzb4: 1huz B:149-334 [75853]
  Other proteins in same PDB: d1huza1, d1huza3, d1huzb1, d1huzb3
  complexed with cr, mdn
Domain(s) for 1jn3:
- Domain d1jn3a2: 1jn3 A:149-335 [75865]
  Other proteins in same PDB: d1jn3a1
  mutant
Domain(s) for 1nom:
- Domain d1nom_2: 1nom 149-335 [75930]
  Other proteins in same PDB: d1nom_1
  complexed with mn
Domain(s) for 1rpl:
- Domain d1rpl_2: 1rpl 149-335 [75934]
  Other proteins in same PDB: d1rpl_1
Domain(s) for 1zqu:
- Domain d1zqu_2: 1zqu 149-335 [75976]
  Other proteins in same PDB: d1zqu_1
Domain(s) for 1zqv:
- Domain d1zqv_2: 1zqv 149-335 [75978]
  Other proteins in same PDB: d1zqv_1
  complexed with ca
Domain(s) for 1zqw:
- Domain d1zqw_2: 1zqw 149-335 [75980]
  Other proteins in same PDB: d1zqw_1
Domain(s) for 1zqx:
- Domain d1zqx_2: 1zqx 149-335 [75982]
  Other proteins in same PDB: d1zqx_1
Domain(s) for 1zqy:
- Domain d1zqy_2: 1zqy 149-335 [75984]
  Other proteins in same PDB: d1zqy_1
Domain(s) for 1zqz:
- Domain d1zqz_2: 1zqz 149-335 [75986]
  Other proteins in same PDB: d1zqz_1
  complexed with mn
Domain(s) for 2bpc:
- Domain d2bpc_2: 2bpc 149-335 [75990]
  Other proteins in same PDB: d2bpc_1
  complexed with mn
Domain(s) for 2bpf:
- Domain d2bpfa4: 2bpf A:149-335 [75992]
  Other proteins in same PDB: d2bpfa1, d2bpfa3
  protein/DNA complex; complexed with dct, mg
Domain(s) for 2bpg:
1. Domain d2bpga4: 2bpg A:149-335 [75994]
  Other proteins in same PDB: d2bpga1, d2bpga3, d2bpgb1, d2bpgb3
2. Domain d2bpgb4: 2bpg B:149-335 [75996]
  Other proteins in same PDB: d2bpga1, d2bpga3, d2bpgb1, d2bpgb3
  protein/DNA complex; complexed with dct, mg

More info for Species Rat (Rattus norvegicus) [TaxId:10116] from d.218.1.2 DNA polymerase beta, catalytic (31 kD) fragment

Timeline for Species Rat (Rattus norvegicus) [TaxId:10116] from d.218.1.2 DNA polymerase beta, catalytic (31 kD) fragment:

Species Rat (Rattus norvegicus) [TaxId:10116] from d.218.1.2 DNA polymerase beta, catalytic (31 kD) fragment first appeared in SCOP 1.63
Species Rat (Rattus norvegicus) [TaxId:10116] from d.218.1.2 DNA polymerase beta, catalytic (31 kD) fragment appears in SCOP 1.67
Species Rat (Rattus norvegicus) [TaxId:10116] from d.218.1.2 DNA polymerase beta, catalytic (31 kD) fragment appears in the current release, SCOPe 2.08, called Species Norway rat (Rattus norvegicus) [TaxId:10116] from d.218.1.2 DNA polymerase beta, catalytic (31 kD) fragment