SCOPe 2.02: Domain d1nexb2: 1nex B:370-744

Lineage for d1nexb2 (1nex B:370-744)

1. Root: SCOPe 2.02

2. Class b: All beta proteins [48724] (174 folds)

3. Fold b.69: 7-bladed beta-propeller [50964] (14 superfamilies)
   consists of seven 4-stranded beta-sheet motifs; meander

4. Superfamily b.69.4: WD40 repeat-like [50978] (3 families)
   also contains 8-bladed propellers

5. Family b.69.4.1: WD40-repeat [50979] (11 proteins)
   this is a repeat family; one repeat unit is 1tyq C:201-243 found in domain

6. Protein Cdc4 propeller domain [82169] (1 species)
   8-bladed beta-propeller without perfect 8-fold symmetry

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [82170] (1 PDB entry)

8. Domain d1nexb2: 1nex B:370-744 [80444]
   Other proteins in same PDB: d1nexa1, d1nexa2, d1nexb1, d1nexc1, d1nexc2, d1nexd1

Details for d1nexb2

PDB Entry: 1nex, 2.7 Å

PDB Description: crystal structure of scskp1-sccdc4-cpd peptide complex

PDB Compounds: (B:) CDC4 protein

SCOPe Domain Sequences for d1nexb2:

Sequence, based on SEQRES records:

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
fvpqrttlrghmtsvitclqfednyvitgaddkmirvydsinkkfllqlsghdggvwalk
yahggilvsgstdrtvrvwdikkgccthvfeghnstvrcldiveyknikyivtgsrdntl
hvwklpkessvpdhgeehdyplvfhtpeenpyfvgvlrghmasvrtvsghgnivvsgsyd
ntlivwdvaqmkclyilsghtdriystiydherkrcisasmdttiriwdlengelmytlq
ghtalvgllrlsdkflvsaaadgsirgwdandysrkfsyhhtnlsaittfyvsdnilvsg
senqfniynlrsgklvhanilkdadqiwsvnfkgktlvaavekdgqsfleildfs

Sequence, based on observed residues (ATOM records):

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
fvpqrttlrghmtsvitclqfednyvitgaddkmirvydsinkkfllqlsghdggvwalk
yahggilvsgstdrtvrvwdikkgccthvfeghnstvrcldiveyknikyivtgsrdntl
hvwklpkdyplvfhtpeenpyfvgvlrghmasvrtvsghgnivvsgsydntlivwdvaqm
kclyilsghtdriystiydherkrcisasmdttiriwdlengelmytlqghtalvgllrl
sdkflvsaaadgsirgwdandysrkfsyhhtnlsaittfyvsdnilvsgsenqfniynlr
sgklvhanilkdadqiwsvnfkgktlvaavekdgqsfleildfs

Timeline for d1nexb2:

• d1nexb2 first appeared in SCOP 1.63
  
• d1nexb2 appears in SCOPe 2.01
  
• d1nexb2 appears in SCOPe 2.03
  
• d1nexb2 appears in the current release, SCOPe 2.08