SCOPe 2.08: Domain d1jmo.1: 1jmo L:,H:

Lineage for d1jmo.1 (1jmo L:,H:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
   barrel, closed; n=6, S=8; greek-key
   duplication: consists of two domains of the same fold

4. Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families)

5. Family b.47.1.2: Eukaryotic proteases [50514] (49 proteins)

6. Protein Thrombin [50531] (2 species)

7. Species Human (Homo sapiens) [TaxId:9606] [50532] (171 PDB entries)
   Uniprot P00734 331-361,364-421 ! Uniprot P00734 334-360 364-510 518-619 ! Uniprot P00734 328-620 ! Uniprot P00734 355-621 ! Uniprot P00734 328-620

8. Domain d1jmo.1: 1jmo L:,H: [77137]
   Other proteins in same PDB: d1jmoa_
   complex with a heparin cofactor II mutant
   complexed with mpd, na, nag

Details for d1jmo.1

PDB Entry: 1jmo, 2.2 Å

PDB Description: crystal structure of the heparin cofactor ii-s195a thrombin complex

PDB Compounds: (H:) Thrombin, heavy chain, (L:) Thrombin, light chain

SCOPe Domain Sequences for d1jmo.1:

Sequence; same for both SEQRES and ATOM records:

>g1jmo.1 b.47.1.2 (L:,H:) Thrombin {Human (Homo sapiens) [TaxId: 9606]}
atseyqtffnprtfgsgeadcglrplfekksledkterellesyidgXivegsdaeigms
pwqvmlfrkspqellcgaslisdrwvltaahcllyppwdknftendllvrigkhsrtrye
rniekismlekiyihprynwrenldrdialmklkkpvafsdyihpvclpdretaasllqa
gykgrvtgwgnlketwtanvgkgqpsvlqvvnlpiverpvckdstriritdnmfcagykp
degkrgdacegdaggpfvmkspfnnrwyqmgivswgegcdrdgkygfythvfrlkkwiqk
vidqfge

Timeline for d1jmo.1:

• d1jmo.1 first appeared in SCOP 1.63
  
• d1jmo.1 appears in SCOPe 2.07