SCOPe 2.08: Domain d1gteb2: 1gte B:533-844

Lineage for d1gteb2 (1gte B:533-844)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.4: FMN-linked oxidoreductases [51395] (2 families)

5. Family c.1.4.1: FMN-linked oxidoreductases [51396] (19 proteins)

6. Protein Dihydropyrimidine dehydrogenase, domain 4 [51410] (1 species)

7. Species Pig (Sus scrofa) [TaxId:9823] [51411] (9 PDB entries)

8. Domain d1gteb2: 1gte B:533-844 [70446]
   Other proteins in same PDB: d1gtea1, d1gtea3, d1gtea4, d1gtea5, d1gteb1, d1gteb3, d1gteb4, d1gteb5, d1gtec1, d1gtec3, d1gtec4, d1gtec5, d1gted1, d1gted3, d1gted4, d1gted5
   complexed with fad, fmn, iur, sf4
   has additional subdomain(s) that are not in the common domain
   has additional insertions and/or extensions that are not grouped together

Details for d1gteb2

PDB Entry: 1gte, 1.65 Å

PDB Description: dihydropyrimidine dehydrogenase (dpd) from pig, binary complex with 5- iodouracil

PDB Compounds: (B:) dihydropyrimidine dehydrogenase

SCOPe Domain Sequences for d1gteb2:

Sequence, based on SEQRES records:

>d1gteb2 c.1.4.1 (B:533-844) Dihydropyrimidine dehydrogenase, domain 4 {Pig (Sus scrofa) [TaxId: 9823]}
isvemaglkfinpfglasaapttsssmirrafeagwgfaltktfsldkdivtnvsprivr
gttsgpmygpgqssflnielisektaaywcqsvtelkadfpdniviasimcsynkndwme
lsrkaeasgadalelnlscphgmgergmglacgqdpelvrnicrwvrqavqipffakltp
nvtdivsiaraakeggadgvtatntvsglmglkadgtpwpavgagkrttyggvsgtairp
ialravttiaralpgfpilatggidsaesglqflhsgasvlqvcsavqnqdftviqdyct
glkallylksie

Sequence, based on observed residues (ATOM records):

>d1gteb2 c.1.4.1 (B:533-844) Dihydropyrimidine dehydrogenase, domain 4 {Pig (Sus scrofa) [TaxId: 9823]}
isvemaglkfinpfglasaapttsssmirrafeagwgfaltktfsldkdivtnvsprivr
gttsgpmygpgqssflnielisektaaywcqsvtelkadfpdniviasimcsynkndwme
lsrkaeasgadalelnlscphmglacgqdpelvrnicrwvrqavqipffakltpnvtdiv
siaraakeggadgvtatntvsglmglkadgtpwpavgagkrttyggvsgtairpialrav
ttiaralpgfpilatggidsaesglqflhsgasvlqvcsavqnqdftviqdyctglkall
ylksie

Timeline for d1gteb2:

• d1gteb2 first appeared in SCOP 1.61
  
• d1gteb2 appears in SCOPe 2.07