SCOPe 2.04: Domain d1jkgb_: 1jkg B:

Lineage for d1jkgb_ (1jkg B:)

1. Root: SCOPe 2.04

2. Class d: Alpha and beta proteins (a+b) [53931] (380 folds)

3. Fold d.17: Cystatin-like [54402] (7 superfamilies)
   Core: alpha-beta(4); helix packs against coiled antiparallel beta-sheet

4. Superfamily d.17.4: NTF2-like [54427] (31 families)
   has a beta-alpha(2)-beta insertion after the main helix

5. Family d.17.4.2: NTF2-like [54431] (6 proteins)

6. Protein NTF2-like domain of Tip associating protein, TAP [69677] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [69678] (2 PDB entries)

8. Domain d1jkgb_: 1jkg B: [66796]
   Other proteins in same PDB: d1jkga_

Details for d1jkgb_

PDB Entry: 1jkg, 1.9 Å

PDB Description: Structural basis for the recognition of a nucleoporin FG-repeat by the NTF2-like domain of TAP-p15 mRNA nuclear export factor

PDB Compounds: (B:) tap

SCOPe Domain Sequences for d1jkgb_:

Sequence, based on SEQRES records:

>d1jkgb_ d.17.4.2 (B:) NTF2-like domain of Tip associating protein, TAP {Human (Homo sapiens) [TaxId: 9606]}
appckgsyfgtenlkslvlhflqqyyaiydsgdrqglldayhdgaccslsipfipqnpar
sslaeyfkdsrnvkklkdptlrfrllkhtrlnvvaflnelpktqhdvnsfvvdisaqtst
llcfsvngvfkevdgksrdslraftrtfiavpasnsglcivndelfvrnasseeiqrafa
mpaptp

Sequence, based on observed residues (ATOM records):

>d1jkgb_ d.17.4.2 (B:) NTF2-like domain of Tip associating protein, TAP {Human (Homo sapiens) [TaxId: 9606]}
appckgsyfgtenlkslvlhflqqyyaiydsgdrqglldayhdgaccslsipfisslaey
fkdsrnvkklkdptlrfrllkhtrlnvvaflnelpktqhdvnsfvvdisaqtstllcfsv
ngvfkevdgksrdslraftrtfiavpasnsglcivndelfvrnasseeiqrafampaptp

Timeline for d1jkgb_:

• d1jkgb_ first appeared in SCOP 1.59
  
• d1jkgb_ appears in SCOPe 2.03
  
• d1jkgb_ appears in SCOPe 2.05
  
• d1jkgb_ appears in the current release, SCOPe 2.08, called d1jkgb1