SCOPe 2.02: Domain d1jfia_: 1jfi A:

Lineage for d1jfia_ (1jfi A:)

1. Root: SCOPe 2.02

2. Class a: All alpha proteins [46456] (284 folds)

3. Fold a.22: Histone-fold [47112] (1 superfamily)
   core: 3 helices; long middle helix is flanked at each end with shorter ones

4. Superfamily a.22.1: Histone-fold [47113] (4 families)

5. Family a.22.1.3: TBP-associated factors, TAFs [47134] (14 proteins)

6. Protein Negative cofactor 2, NC2, alpha chain [63507] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [63508] (1 PDB entry)

8. Domain d1jfia_: 1jfi A: [62936]
   Other proteins in same PDB: d1jfib_, d1jfic1, d1jfic2
   protein/DNA complex

Details for d1jfia_

PDB Entry: 1jfi, 2.62 Å

PDB Description: crystal structure of the nc2-tbp-dna ternary complex

PDB Compounds: (A:) Transcription Regulator NC2 alpha chain

SCOPe Domain Sequences for d1jfia_:

Sequence, based on SEQRES records:

>d1jfia_ a.22.1.3 (A:) Negative cofactor 2, NC2, alpha chain {Human (Homo sapiens) [TaxId: 9606]}
arfpparikkimqtdeeigkvaaavpviisralelflesllkkacqvtqsrnaktmttsh
lkqcie

Sequence, based on observed residues (ATOM records):

>d1jfia_ a.22.1.3 (A:) Negative cofactor 2, NC2, alpha chain {Human (Homo sapiens) [TaxId: 9606]}
arfpparikkimqtdeeigkvaaavpviisralelflesllkkacqvtqsrtmttshlkq
cie

Timeline for d1jfia_:

• d1jfia_ first appeared in SCOP 1.57
  
• d1jfia_ appears in SCOPe 2.01
  
• d1jfia_ appears in SCOPe 2.03
  
• d1jfia_ appears in the current release, SCOPe 2.08