SCOPe 2.08: Domain d1io4d_: 1io4 D:

Lineage for d1io4d_ (1io4 D:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.54: Core binding factor beta, CBF [50722] (1 superfamily)
   barrel, closed; n=6, S=10; meander; capped at both ends by alpha-helices

4. Superfamily b.54.1: Core binding factor beta, CBF [50723] (1 family)
   automatically mapped to Pfam PF02312

5. Family b.54.1.1: Core binding factor beta, CBF [50724] (2 proteins)

6. Protein Core binding factor beta, CBF [50725] (2 species)

7. Species Mouse (Mus musculus) [TaxId:10090] [50727] (3 PDB entries)

8. Domain d1io4d_: 1io4 D: [62617]
   Other proteins in same PDB: d1io4a_, d1io4b_, d1io4c_
   protein/DNA complex; complexed with au

Details for d1io4d_

PDB Entry: 1io4, 3 Å

PDB Description: crystal structure of runx-1/aml1/cbfalpha runt domain-cbfbeta core domain heterodimer and c/ebpbeta bzip homodimer bound to a dna fragment from the csf-1r promoter

PDB Compounds: (D:) core-binding factor, beta subunit

SCOPe Domain Sequences for d1io4d_:

Sequence, based on SEQRES records:

>d1io4d_ b.54.1.1 (D:) Core binding factor beta, CBF {Mouse (Mus musculus) [TaxId: 10090]}
prvvpdqrskfeneeffrklsreceikytgfrdrpheerqtrfqnacrdgrseiafvatg
tnlslqffpaswqgeqrqtpsreyvdlereagkvylkapmilngvcviwkgwidlhrldg
mgclefdeeraqqedalaq

Sequence, based on observed residues (ATOM records):

>d1io4d_ b.54.1.1 (D:) Core binding factor beta, CBF {Mouse (Mus musculus) [TaxId: 10090]}
prvvpdqrskfeneeffrklsreceikytgfrdrpheerqtrfqnacrdgrseiafvatg
tnlslqffpsreyvdlereagkvylkapmilngvcviwkgwidlhrldgmgclefdeera
qqedalaq

Timeline for d1io4d_:

• d1io4d_ first appeared in SCOP 1.57
  
• d1io4d_ appears in SCOPe 2.07