SCOPe 2.07: Protein: Collagen-like peptides

Lineage for Protein: Collagen-like peptides

Root: SCOPe 2.07
Class k: Designed proteins [58788] (44 folds)
Fold k.3: Collagen-like peptides [58805] (1 superfamily)
Superfamily k.3.1: Collagen-like peptides [58806] (1 family)
Family k.3.1.1: Collagen-like peptides [58807] (1 protein)
Protein Collagen-like peptides [58808] (8 species)

Species:

Synthetic (contains biological sequence) [100902] (1 PDB entry)
- Domains for 1bkv:
  1. Domain d1bkva1: 1bkv A:10-21 [46402]
    Other proteins in same PDB: d1bkva2, d1bkva3, d1bkvb2, d1bkvb3, d1bkvc2, d1bkvc3
    complexed with acy
  2. Domain d1bkvb1: 1bkv B:40-51 [46403]
    Other proteins in same PDB: d1bkva2, d1bkva3, d1bkvb2, d1bkvb3, d1bkvc2, d1bkvc3
    complexed with acy
  3. Domain d1bkvc1: 1bkv C:70-81 [46404]
    Other proteins in same PDB: d1bkva2, d1bkva3, d1bkvb2, d1bkvb3, d1bkvc2, d1bkvc3
    complexed with acy
Synthetic (contains integrin-binding sequence) [64663] (2 PDB entries)
1. Domains for 1dzi:
  1. Domain d1dzib_: 1dzi B: [59143]
    Other proteins in same PDB: d1dzia_
    complexed with co
  2. Domain d1dzic_: 1dzi C: [59144]
    Other proteins in same PDB: d1dzia_
    complexed with co
  3. Domain d1dzid_: 1dzi D: [59145]
    Other proteins in same PDB: d1dzia_
    complexed with co
2. Domains for 1q7d:
  1. Domain d1q7da_: 1q7d A: [96032]
  2. Domain d1q7db_: 1q7d B: [96033]
  3. Domain d1q7dc_: 1q7d C: [96034]
Synthetic (pro-pro-gly)n [58809] (4 PDB entries)
1. Domains for 1a3i:
  1. Domain d1a3ia_: 1a3i A: [46396]
    complexed with acy
  2. Domain d1a3ib_: 1a3i B: [46397]
    complexed with acy
  3. Domain d1a3ic_: 1a3i C: [46398]
    complexed with acy
2. Domains for 1a3j:
  1. Domain d1a3ja_: 1a3j A: [46390]
  2. Domain d1a3jb_: 1a3j B: [46391]
  3. Domain d1a3jc_: 1a3j C: [46392]
3. Domains for 1cag:
  1. Domain d1caga1: 1cag A:10-21 [46393]
    Other proteins in same PDB: d1caga2, d1caga3, d1cagb2, d1cagb3, d1cagc2, d1cagc3
    complexed with acy
  2. Domain d1cagb1: 1cag B:40-51 [46394]
    Other proteins in same PDB: d1caga2, d1caga3, d1cagb2, d1cagb3, d1cagc2, d1cagc3
    complexed with acy
  3. Domain d1cagc1: 1cag C:70-81 [46395]
    Other proteins in same PDB: d1caga2, d1caga3, d1cagb2, d1cagb3, d1cagc2, d1cagc3
    complexed with acy
4. Domains for 1g9w:
  1. Domain d1g9wa_: 1g9w A: [60403]
  2. Domain d1g9wb_: 1g9w B: [60404]
  3. Domain d1g9wc_: 1g9w C: [60405]
Synthetic [(pro-hyp-gly)4-glu-lys-gly(pro-hyp-gly)5] [58810] (1 PDB entry)
- Domains for 1qsu:
  1. Domain d1qsua1: 1qsu A:10-21 [46399]
    Other proteins in same PDB: d1qsua2, d1qsua3, d1qsub2, d1qsub3, d1qsuc2, d1qsuc3
  2. Domain d1qsub1: 1qsu B:40-51 [46400]
    Other proteins in same PDB: d1qsua2, d1qsua3, d1qsub2, d1qsub3, d1qsuc2, d1qsuc3
  3. Domain d1qsuc1: 1qsu C:70-81 [46401]
    Other proteins in same PDB: d1qsua2, d1qsua3, d1qsub2, d1qsub3, d1qsuc2, d1qsuc3
Synthetic [(pro-hyp-gly)4-pg-(pro-hyp-gly)5] [103784] (1 PDB entry)
contains a discontinuity in the repeating tripeptide sequence
- Domains for 1ei8:
  1. Domain d1ei8a1: 1ei8 A:10-20 [90447]
    Other proteins in same PDB: d1ei8a2, d1ei8a3, d1ei8b2, d1ei8b3, d1ei8c2, d1ei8c3, d1ei8d2, d1ei8d3, d1ei8e2, d1ei8e3, d1ei8f2, d1ei8f3
  2. Domain d1ei8b1: 1ei8 B:40-50 [90448]
    Other proteins in same PDB: d1ei8a2, d1ei8a3, d1ei8b2, d1ei8b3, d1ei8c2, d1ei8c3, d1ei8d2, d1ei8d3, d1ei8e2, d1ei8e3, d1ei8f2, d1ei8f3
  3. Domain d1ei8c1: 1ei8 C:70-80 [90449]
    Other proteins in same PDB: d1ei8a2, d1ei8a3, d1ei8b2, d1ei8b3, d1ei8c2, d1ei8c3, d1ei8d2, d1ei8d3, d1ei8e2, d1ei8e3, d1ei8f2, d1ei8f3
  4. Domain d1ei8d1: 1ei8 D:100-110 [90450]
    Other proteins in same PDB: d1ei8a2, d1ei8a3, d1ei8b2, d1ei8b3, d1ei8c2, d1ei8c3, d1ei8d2, d1ei8d3, d1ei8e2, d1ei8e3, d1ei8f2, d1ei8f3
  5. Domain d1ei8e1: 1ei8 E:130-140 [90451]
    Other proteins in same PDB: d1ei8a2, d1ei8a3, d1ei8b2, d1ei8b3, d1ei8c2, d1ei8c3, d1ei8d2, d1ei8d3, d1ei8e2, d1ei8e3, d1ei8f2, d1ei8f3
  6. Domain d1ei8f1: 1ei8 F:160-170 [90452]
    Other proteins in same PDB: d1ei8a2, d1ei8a3, d1ei8b2, d1ei8b3, d1ei8c2, d1ei8c3, d1ei8d2, d1ei8d3, d1ei8e2, d1ei8e3, d1ei8f2, d1ei8f3
Synthetic, (pro-hyp-gly)n [111543] (3 PDB entries)
1. Domains for 1v4f:
  1. Domain d1v4fa_: 1v4f A: [108352]
  2. Domain d1v4fb_: 1v4f B: [108353]
  3. Domain d1v4fc_: 1v4f C: [108354]
2. Domains for 1v6q:
  1. Domain d1v6qa_: 1v6q A: [108398]
  2. Domain d1v6qb_: 1v6q B: [108399]
  3. Domain d1v6qc_: 1v6q C: [108400]
3. Domains for 1v7h:
  1. Domain d1v7ha_: 1v7h A: [108403]
  2. Domain d1v7hb_: 1v7h B: [108404]
  3. Domain d1v7hc_: 1v7h C: [108405]
Synthetic, (pro-pro-gly)9 [83014] (1 PDB entry)
- Domains for 1itt:
  1. Domain d1itta_: 1itt A: [76788]
    high resolution structure
  2. Domain d1ittb_: 1itt B: [76789]
    high resolution structure
  3. Domain d1ittc_: 1itt C: [76790]
    high resolution structure
Synthetic, [(pro-pro-gly)10]3 triple helix model [70052] (2 PDB entries)
1. Domains for 1k6f:
  1. Domain d1k6fa1: 1k6f A:10-21 [68217]
    Other proteins in same PDB: d1k6fa2, d1k6fa3, d1k6fb2, d1k6fb3, d1k6fc2, d1k6fc3, d1k6fd2, d1k6fd3, d1k6fe2, d1k6fe3, d1k6ff2, d1k6ff3
  2. Domain d1k6fb1: 1k6f B:10-21 [68218]
    Other proteins in same PDB: d1k6fa2, d1k6fa3, d1k6fb2, d1k6fb3, d1k6fc2, d1k6fc3, d1k6fd2, d1k6fd3, d1k6fe2, d1k6fe3, d1k6ff2, d1k6ff3
  3. Domain d1k6fc1: 1k6f C:10-21 [68219]
    Other proteins in same PDB: d1k6fa2, d1k6fa3, d1k6fb2, d1k6fb3, d1k6fc2, d1k6fc3, d1k6fd2, d1k6fd3, d1k6fe2, d1k6fe3, d1k6ff2, d1k6ff3
  4. Domain d1k6fd1: 1k6f D:10-21 [68220]
    Other proteins in same PDB: d1k6fa2, d1k6fa3, d1k6fb2, d1k6fb3, d1k6fc2, d1k6fc3, d1k6fd2, d1k6fd3, d1k6fe2, d1k6fe3, d1k6ff2, d1k6ff3
  5. Domain d1k6fe1: 1k6f E:10-21 [68221]
    Other proteins in same PDB: d1k6fa2, d1k6fa3, d1k6fb2, d1k6fb3, d1k6fc2, d1k6fc3, d1k6fd2, d1k6fd3, d1k6fe2, d1k6fe3, d1k6ff2, d1k6ff3
  6. Domain d1k6ff1: 1k6f F:10-21 [68222]
    Other proteins in same PDB: d1k6fa2, d1k6fa3, d1k6fb2, d1k6fb3, d1k6fc2, d1k6fc3, d1k6fd2, d1k6fd3, d1k6fe2, d1k6fe3, d1k6ff2, d1k6ff3
2. Domains for 1nay:
  1. Domain d1naya_: 1nay A: [85502]
    Other proteins in same PDB: d1nayb2
    foldon is a trimerisation domain of T4 fibritin
  2. Domain d1nayb1: 1nay B:216-261 [85503]
    Other proteins in same PDB: d1nayb2
    foldon is a trimerisation domain of T4 fibritin
  3. Domain d1nayc_: 1nay C: [85504]
    Other proteins in same PDB: d1nayb2
    foldon is a trimerisation domain of T4 fibritin

More info for Protein Collagen-like peptides from k.3.1.1: Collagen-like peptides

Timeline for Protein Collagen-like peptides from k.3.1.1: Collagen-like peptides:

Protein Collagen-like peptides from k.3.1.1: Collagen-like peptides first appeared (with stable ids) in SCOP 1.55
Protein Collagen-like peptides from k.3.1.1: Collagen-like peptides appears in SCOPe 2.06
Protein Collagen-like peptides from k.3.1.1: Collagen-like peptides appears in the current release, SCOPe 2.08